Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1663 ATGAAAGGGCGATCGAATCGCCCTCAGAGTTTTGACCCTCCGCCGGACGAATGGGTCGACGGTTCATGGACGGTGGACTGCATCTGCGGCGTCACGTTTGACGACGGCGAAGAGATGGTAAAGTGTGACGAGTGCGATGTTTGGGTTCATACGCGTTGTTCTCGTTATGTGAAAGGTGATGATATGTTTGCTTGTGATAAGTGCAAGAATAAGAACAACCGTGCGGGAATGGAAAACAATCCGGAAGAAACCGAGGTTGCTCGATTGCTTGTTGAGCTTCCGACGAAGACGATTTCCTTAGAGAGAAGGAATAATAATAGAAGTAATTCTCTTTCGTCTGCTAGAGCTGGGTCTTGTTCGCGTCGTCCTTTTAAGTTATGGACTGATATACCTATGGAGGAGAGGGTTCATGTTCAGGGTATTCCTGGTGGTGATCCTTCTCTGTTTGCTGGAAAGGCTGTGTCGTCGATTTTTGGTCCGCAGTTGTGGAAATGTACTGGTTATGTTCCTAAGAAGTTTAGTTTTCAGTATAGGGAATTTCCGTCTTGGTATGAGAATGATGATAAGGGTGTACAAGAGAATGATAATGATATTAAGGATAAGGATAATGGGGCTGGGGTTCTTTTATCGTTATCGAAAGAGACTAATAATGTGTTAGCTACGTCTCCTGTTGCGGCTTTGGTTGATATGAGATCAAGCCAGGGTAAGAAGGGCTTTAAGGAGAGTGGAATGGGCAAGTTTGGCAGAGATCATATGCCACGTGTCCATAATGCGGTCAAGAAGGAGAGGACTTTGATTAGGCCTTTTGTTCAGTCGAGTAAGCGTAGGAAAGATGAATTCTCCAAAGACCGGAGTGGGAAGAAGAAGCGGGTCAAGACTTCTGAAAGAGAGGAGGTAGATCTCAAGAGGAGGACTTCTGATCGAGAGGATGTAGAACCCAAGAGGAGGACTTCTGATCGAGAGGATGTAGATCCCAAGAGGAGGACTTCGGATCGAGAAGATGTAGATTCCAAGAGGAGGACCCCACATTCTTCTAAAGCAGTGTTTACACCCACCAGTGATGCAAAACAATTGGCATTTTATGGAGACAGAGGTCCGAAGGTTTTCAAGGATGGCATTCGGAGCATAAAGAATAAAAACTCAAAAGACACAGTTGTTCGAGATCATATTTCTAATGATTCTTTTGCTGTTGGTACCATCATGGAGGTATCAAATAACAACTTGACAACTACTGAGGAGTCTTCAGAAGCTTTATATCCTAAGAAATCAAGACGTAGTCATTCTGCTGGAGATATATTAGCAGAAGAGAAGACTGGCCATAAAGTTCTGGAGATGTCTTCTAAGACTGATGATGCTGTTACATCAGTTCTAAAGCATACGTATCTTGAAAATGCCTCAGCTAAAAAGAAGGGTGGAGATTGCTTGGAAGCTAATAATGTGGATGATACTTTAGTAGTAAGAAGCGCTGCGAGTCCTCAGCCAGAAGATCATTCTGGTTCTGCACCAGAACATATGGAAAAGCAAATTTCTCAAGATATTGACTGTAACCAGCATCCAAGCTCTGGACAATGCAAAGTTAAGGGGATGATAGGTGAAGATGACGGTGATAAGTTTAAGCTCCCGGATTTTCATTCTTCTCCTATCAGTGATCTTAAAAACAATGGACAGCCATCTGATGCCACATCTGATATTGATAAAGTGAATGACGGTGCAGTTCTCAGTTTACCTTTATGTGAAAATAAGGCGGTTAATGTTGGCATACCATCAGAAGTAGTCCCTGATAACCATACCACTGAACTCAATGATTTACCTGCTAATTTGTGTCTTGGAAAAGTAGAGGGGTCTGAAGGTTCCTTGGAACCACACAAGAGATTTTCAGAATCAAAAGATGGTTCGGACTCTGTTAAGAATGCATCAAAATCTGAAGCACTTGAATGCCCAAGTAAAATGCTAGTTTCTGTCGGGAAGTCGTCTCCAACTTCATCAACCATGAACTCCTCCAAATCGTTGAGTCATGACTTCAAATCTGAAGATGCTGAAATCGCTAATCCATTTACGAAGCATGGGGCTAAAGCTGATCGTAGCATTCACTTAAAGAGTGAAAGTTGTAAGAATGATACTGCAATGGATGAAGTTCCAAGGAAGTATGTAAGAGAACGTCCAAAATCCTCTTTGAATTCCAATTCAAAAGGATTACATTCAAGCAGGAGTACACAGAATTCCATTTCAAAGCAAGTAAATCCAGATGCGAGAGATTCTGTTCATAGTTCATCATCTAAACCATCCCCGGGTCATCAGATTCCAAGTGTTTTTGGTTCTAGTGAGACTAATGCATCGATGCACCATAAAAAAGAATCACAAGTACAGAATAAGATTTCTTCTTCAGTGCCACAGAAAGTAGAAAAGCTTAATCAAACAAATGCCCATCCTTCCTCGAAGTTGAATCAGAGCCACACACCATCATTGAATCCTTCTCCAACGTTAAATTCGTCAATGCTAAGTGATGAAGAGCTGGCTTTGCTCTTGCATCAAGAACTGAATAGTTCACCTCGTGTACCCCGGGTACCCCGTGCACGTCAGACGGGTAGCTTGCCACAGTTGACTTCTACCAGTGCTACAAATATGCTAATGAAGCGAGCATCAGTTGGAGGAAAGGATAACCATTTGGTGTCTAAAAGAAAATACAAGGATGCAACTAGAGATGGGTTTTGCAGTTCTCGTGACCATGAAGATGAAACTAAAAAGATAGAGAAAGAGAAGGGTCAATCATCTGATCAGAGAAAACAAGACATGGCACGTGTGGAAGATGCTTTTGTAAAGGAAGAAGGAGGCCGTGCATGTGTGACAGCTACAAATTCTATTACAAGTAATATTGTTTCCACAACCTCTTCCATTGGAAACGGCCGTTCACCTTCCCCTCGCGAGGATCGTAATTTGTCATCAATGAGGAGCTCGCCCAGGAATATATCTGATGATGATACAGCAACTGCTGGAAGGCCAGTTCATCACACCTTACCTGGCTTAATCAATAATATAATGAGCAAGGGCAAACGGATGACATATGAGGAACTCTGTAATGTTGTTGAACCGCACTGGCCCAACTTGAGGAAACATAACGGGGAGCGATATGCATATGCAAGTCATTCCCAAGCTGTTCTTGATTGTTTGAGGAACCGACATGAATGGGCGAGGTTGGTTGATCGTGGTCCAAAGACAAATACTAATAGGAAAAGGCGTAGTAAGCTGGACACTGAAGAATCTGATGACAATGGATATGAAAAAGGAAAAACTGCAAAAGAGACCGAAGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAACGCAGGCGGTTGGCTCTTCAGGGAAGAGCAGTAAAGGATGTCAGGAGGAGACAAAAAGCTGATTCACTAACTGGCGATGACGCTGGTCCATTCTCCAATACTAGTGAAGAGAGCATGTTTAGTGAGGATGAAGTTCAAGTTGACAGAATACGTCCATCAGGAAGTACATCAGATGACGCGGGGAGTGCTTAA 3558 0.4289 MKGRSNRPQSFDPPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECDVWVHTRCSRYVKGDDMFACDKCKNKNNRAGMENNPEETEVARLLVELPTKTISLERRNNNRSNSLSSARAGSCSRRPFKLWTDIPMEERVHVQGIPGGDPSLFAGKAVSSIFGPQLWKCTGYVPKKFSFQYREFPSWYENDDKGVQENDNDIKDKDNGAGVLLSLSKETNNVLATSPVAALVDMRSSQGKKGFKESGMGKFGRDHMPRVHNAVKKERTLIRPFVQSSKRRKDEFSKDRSGKKKRVKTSEREEVDLKRRTSDREDVEPKRRTSDREDVDPKRRTSDREDVDSKRRTPHSSKAVFTPTSDAKQLAFYGDRGPKVFKDGIRSIKNKNSKDTVVRDHISNDSFAVGTIMEVSNNNLTTTEESSEALYPKKSRRSHSAGDILAEEKTGHKVLEMSSKTDDAVTSVLKHTYLENASAKKKGGDCLEANNVDDTLVVRSAASPQPEDHSGSAPEHMEKQISQDIDCNQHPSSGQCKVKGMIGEDDGDKFKLPDFHSSPISDLKNNGQPSDATSDIDKVNDGAVLSLPLCENKAVNVGIPSEVVPDNHTTELNDLPANLCLGKVEGSEGSLEPHKRFSESKDGSDSVKNASKSEALECPSKMLVSVGKSSPTSSTMNSSKSLSHDFKSEDAEIANPFTKHGAKADRSIHLKSESCKNDTAMDEVPRKYVRERPKSSLNSNSKGLHSSRSTQNSISKQVNPDARDSVHSSSSKPSPGHQIPSVFGSSETNASMHHKKESQVQNKISSSVPQKVEKLNQTNAHPSSKLNQSHTPSLNPSPTLNSSMLSDEELALLLHQELNSSPRVPRVPRARQTGSLPQLTSTSATNMLMKRASVGGKDNHLVSKRKYKDATRDGFCSSRDHEDETKKIEKEKGQSSDQRKQDMARVEDAFVKEEGGRACVTATNSITSNIVSTTSSIGNGRSPSPREDRNLSSMRSSPRNISDDDTATAGRPVHHTLPGLINNIMSKGKRMTYEELCNVVEPHWPNLRKHNGERYAYASHSQAVLDCLRNRHEWARLVDRGPKTNTNRKRRSKLDTEESDDNGYEKGKTAKETEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKADSLTGDDAGPFSNTSEESMFSEDEVQVDRIRPSGSTSDDAGSA* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 653 670 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 1067 1185 - -
Tpr1g1663 1185 SMART PHD_3 26 69 IPR001965 -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 614 826 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 249 351 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 722 777 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 896 932 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 789 826 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 1129 1145 - -
Tpr1g1663 1185 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1180 - -
Tpr1g1663 1185 SUPERFAMILY FYVE/PHD zinc finger 16 73 IPR011011 -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 249 343 - -
Tpr1g1663 1185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 76 IPR013083 -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 849 874 - -
Tpr1g1663 1185 PANTHER UNCHARACTERIZED 1 1180 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 1067 1115 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 616 636 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 407 432 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 959 992 - -
Tpr1g1663 1185 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 959 999 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 417 432 - -
Tpr1g1663 1185 MobiDBLite consensus disorder prediction 690 721 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1663 25 68 PHD Transcription Factor Family AT5G22260 44.681 6.81e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1663 - - gmx:100810855 1371.3