Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1630 ATGGAGCCTCACATTAATGGTTCTCTTCCATTAATATTGCTAATTATTACTACTTTCCTTTTACTATCTCTCCATGCCAAAGCTGAAAGCTCCACCTACATAGTCCACATGGACAAATCCCTCATGCCTCAAGTCTTCACAAGCCATCATAATTGGTATGAATCCATTCTTCAATCATCAAAAACACAATTTAATGATCATGTTCATCCATCAAAGAAATTGGTTTACACTTATAATCATGCCATGCATGGATTCAGTGCAATACTATCACCAAATGAGTTAAACAATCTTAAAAACTCTCATGGTTTTGTCTCAGCCTATCTTGATAGAACAGCTACAATAGACACAACACATACCTTTGAGTTTCTTTCATTAGACCCTTCAAAAGGGCTATGGAATGCATCAAATTTAGGTGAAAATGTTATTGTTGGTCTTATTGACACCGGTATTTGGCCAGAAAGTGAAAGTTTCAAAGACGATGGAATGTCGAAAAACATCCCAACAAAATGGAAAGGAAAATGTGAAATAGGACAAGATTTCAACACTTCAATGTGTAACTTGAAACTAATTGGTGCTAGATATTTCAACAGAGGTGTAATTGCATCAAAACCAAATGTCAAAATCAGTATGAACTCGCCTCGAGACACACAAGGCCATGGAAGTCACACATCTTCGACAGTTGCCGGTAACTATGTCAATGATGCATCATATTTTGGTTATGCTAAAGGTGTAGCTAGAGGTATTGCACCAAAAGCTAGACTTGCAATGTATAAAGTCCTTTGGGACGAGGGACGAGTGGCTTCTGATGTTCTTGCCGGAATGGACCAAGCTATTGATGATAATGTTGATGTTATTTCAATCTCTTTAGGTTTTGATAATGTTCCACTTTATGAAGATCCAGTTGCAATAGCTTCATTTGCAGCTATGGAGAAAAATGTTATTGTTTCGTCTTCTGCCGGAAATGAAGGTCCAAAACTTAGTACTTTACACAACGGAATCCCTTGGGTTATGACCGTTGCCGCAGGCACAATTGACCGAACTTTTGGGAGTTTGATACTTGGAAACGGCGAAACTATTGTTGGTTGGACTTTGTATCCTATTACTAATGCTTTAGTTCATAATCTTCCACTTGTTTACAACAAAACTTTATCATCATGCAATTCATTTAGTCTTTTAAGTGAAGCTGCAACAAGAGGGATTATTGTCTGTGAAGCATTGGAATCAGTTTCAGTTTTTAACCAAATCAACAATGTTACTTCAGCAAGTGTGGTTGGTGCTGTTTTTATCTCAGAAAATCCAATACTGATTGACCTAGGAAGAGTTTTTTCTCCAAGTATTGTGATTAATCCAAAAGACAAAAAAGCGCTTATTCGATATATAAAGAGTGTTGAATTTCCATTTGCTAGTATCAATTTTGAACAAACATTTGTTGGTATAAAGCCAGCACCAGCTGCAGCTCATTACAGTTCAAGAGGTCCTTCAAAAAGTTATCCAAGAATCTTAAAGCCTGATGTAATGGCACCTGGCTCGAATGTTTTAGCCGCTTATGTTCCGACTTTATCATCGGCTACAATAGGAAGAAACGTTTTTTTATCAAGTAATTACAATCTTCTTTCAGGTACATCAATGGCATGTCCTCATGCATCAGGCATTGCGGCTTTGTTAAAAGCCGCAAAGCCTGATTGGAGTGCAGCTGCTATAAGATCAGCAATAGTTACCACAGCTAATCCATTGGATAATACGCAAAATCAGATTATGGATAATGGTAATCCATCTCAATTCGCTTCGCCTCTTGCTATGGGAGCCGGCGAGATTGATCCTAATAAAGCATTGGATCCTGGCTTAATATACGATGCTACACCACAAGACTATGTTAATCTCCTTTGTGATTTTGGTTATACTCATAATCAAATCTTGACGATTACAAGATCGAAAAAATATAATTGCGATAAACCTTCGCCCGATCTTAATTATCCTTCTTTTATAGCTTTTTATGGTAACAAAGCAAAGACAATGGTGCAAAAGTTTTCGAGGACAGTGACTAATGTTGGAGATGGTGCTGCTAGTTACAATGTGAAGGTGACAAATCCAAAGGGTTGTGTTGTAACTGTGTTACCTGAGAAGTTAACATTTAGTTACAAGAATGAGAAGCAGAGTTACTCTGTTCTTGTAAAGTATAAGAGGAAAAATAAGAAGGAAAATGATGTGTTATTTGGTGACATTGTTTGGGTTGAAGAGGGTGGTGCACATAGTGTTAGGAGTCCTATTGTTGTGGCACCAAATGATATTATGAGTTTTTTATGA 2304 0.3724 MEPHINGSLPLILLIITTFLLLSLHAKAESSTYIVHMDKSLMPQVFTSHHNWYESILQSSKTQFNDHVHPSKKLVYTYNHAMHGFSAILSPNELNNLKNSHGFVSAYLDRTATIDTTHTFEFLSLDPSKGLWNASNLGENVIVGLIDTGIWPESESFKDDGMSKNIPTKWKGKCEIGQDFNTSMCNLKLIGARYFNRGVIASKPNVKISMNSPRDTQGHGSHTSSTVAGNYVNDASYFGYAKGVARGIAPKARLAMYKVLWDEGRVASDVLAGMDQAIDDNVDVISISLGFDNVPLYEDPVAIASFAAMEKNVIVSSSAGNEGPKLSTLHNGIPWVMTVAAGTIDRTFGSLILGNGETIVGWTLYPITNALVHNLPLVYNKTLSSCNSFSLLSEAATRGIIVCEALESVSVFNQINNVTSASVVGAVFISENPILIDLGRVFSPSIVINPKDKKALIRYIKSVEFPFASINFEQTFVGIKPAPAAAHYSSRGPSKSYPRILKPDVMAPGSNVLAAYVPTLSSATIGRNVFLSSNYNLLSGTSMACPHASGIAALLKAAKPDWSAAAIRSAIVTTANPLDNTQNQIMDNGNPSQFASPLAMGAGEIDPNKALDPGLIYDATPQDYVNLLCDFGYTHNQILTITRSKKYNCDKPSPDLNYPSFIAFYGNKAKTMVQKFSRTVTNVGDGAASYNVKVTNPKGCVVTVLPEKLTFSYKNEKQSYSVLVKYKRKNKKENDVLFGDIVWVEEGGAHSVRSPIVVAPNDIMSFL* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1630 767 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Tpr1g1630 767 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Tpr1g1630 767 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Tpr1g1630 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 759 IPR045051 -
Tpr1g1630 767 Pfam Fibronectin type-III domain 655 758 IPR041469 -
Tpr1g1630 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Tpr1g1630 767 CDD PA_subtilisin_like 350 470 - -
Tpr1g1630 767 CDD Peptidases_S8_3 113 576 IPR034197 -
Tpr1g1630 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
Tpr1g1630 767 Gene3D Peptidase S8/S53 domain 140 624 IPR036852 GO:0004252|GO:0006508
Tpr1g1630 767 Gene3D - 345 477 - -
Tpr1g1630 767 Gene3D - 628 760 - -
Tpr1g1630 767 SUPERFAMILY Subtilisin-like 115 615 IPR036852 GO:0004252|GO:0006508
Tpr1g1630 767 ProSiteProfiles Serine proteases, subtilase domain profile. 119 611 - -
Tpr1g1630 767 Pfam Subtilase family 138 582 IPR000209 GO:0006508|GO:0008236
Tpr1g1630 767 PANTHER OS01G0868800 PROTEIN 32 759 - -
Tpr1g1630 767 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1630 Tpr-Chr1 15404770 15407073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1630 11 759 Subtilisin-like Serine Gene Family AT5G67090 41.645 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1630 - - gmx:100806072 1143.26