Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1613 ATGAACTGCTTTCCGTGTTGTGGCCCTCAAAAAAATAAGAAGAGTGACAGCATGAAAGAAAATGATTCTCCCACACAACAGGAGGCCACTTCTGATATGAAGAAACAAAGGGGGGATGAGCAAATCCAAGGAGACCCAAATAACATTAATGCGCATAATTACACTTTTCGTGAGCTTGCAACAGCAACGAAGAATTTTCGACAGGAATGTCTCCTTGGTGAAGGAGGATTTGGAAGAGTTTACAAAGGGGTTATTCCTGCAACTGGACAGGTTGTGGCCGTGAAGCAACTCGACAGACATGCGATGGAAAACAGCAAGGATTTTCTATCTGAAATTTCTCTGCTGAGTCTTGCTCACCATGAGAATCTTGTCAATCTCATTGGTTATTGTGCTGATGGCGATCAACGTCTTTTGGTTTATGAATACTTTCCTGCCACTAATCTTGAAGAACGTCTGCTTGAGAATAAAAAGAATGAACCACCATTAAATTGGTATGAAAGAATGAAAGTAGCAGCAGGTGCATCGAAAGGAATAGAATACTTGCATGACAGCGCCAAGCCCTCAATTATATACCGTGACTTGAAAGCAGCTAACATCTTATTGGATGGTGATCTTAATGTAAAACTATATGATTTCGGAATGGCAAAACTTTGTAGTGGAGACAAGATGAACCATGCACCTCCACGAGTTATGGGTACATATGGTTATTGTGCTCCTGAATATACAACAACCGGTCAATTCTCCTTGAAATCAGACGTATACAGTTTCGGAGTTGTCATGCTTGAACTTATCACTGGTCGACGTGCCATTGACACCACAAGATCTAACGAAGAGCAAAATCTAGTTTCATGGGCACAACCCTTATTCAGGGACCCGAAAAAATATCCAGAAATGGCAGATCCACTTCTGAATAAACATTTTCCAGAAAAGGATCTCAACCAGGCTGTTGCAATAGTAGCAATGTGCTTACAAGAGGAACCAGAAGCTCGTCCTTGGATCAGTGACGTTGTAACCGCTCTGAGTTTTCTTTCGACAGTTCCAGCAGAACCTATTCCACCACCCTTGCGCCCCACTGCTACCTCTGTCTCTAAGCATAGTGTTGCTACTGAAAGCGAATACGATAGTGAGACTGGAAGTGAATCAGAAGGAGAAAGTTCAGATGATGCAGCAAGTTCCAAAAACAACGAAAATAATATCTCAAGCCAATCTCAAAAAAAGGTGTCTTCGAAGAAATCAAGCCGAAAAAGCAGCTCGAGATCAAGGAGTAAAACAAGCAGTAAAGATTCAGCAGATGAAAGTGCTTCTTCAAGTGGAAAAAGCAGTAAAAAATGGCAAAGCTTTGTTGGTAATATAAGCCAAAAGACTAACAAATCGATAAAATCTTCTATCAAAGAATTAAGTCAGAAGAGCAGTAAAAAATCTTCAAGCAAAGAAAAAGGCCAGAAAAGCAGTAGGAAATCTTCCAAAAGAGGTTTAAGCCAGAAAAGCAGTAGGAAATCTTCCAAAAGAGGTTTAAGTGCAAAATCTTCGGCAGATGAAAGCATGCTTTCATATCAAAGAACTGCCTCATCAAGCCAATATACAAGCAGCCGTATGTCTGATCGTAGCAGCAGAAGAGGAAGTGGAAGTGTTTGCTCGGACATTAACGGTAGCAGAAGGATAGAAGAATGA 1671 0.4093 MNCFPCCGPQKNKKSDSMKENDSPTQQEATSDMKKQRGDEQIQGDPNNINAHNYTFRELATATKNFRQECLLGEGGFGRVYKGVIPATGQVVAVKQLDRHAMENSKDFLSEISLLSLAHHENLVNLIGYCADGDQRLLVYEYFPATNLEERLLENKKNEPPLNWYERMKVAAGASKGIEYLHDSAKPSIIYRDLKAANILLDGDLNVKLYDFGMAKLCSGDKMNHAPPRVMGTYGYCAPEYTTTGQFSLKSDVYSFGVVMLELITGRRAIDTTRSNEEQNLVSWAQPLFRDPKKYPEMADPLLNKHFPEKDLNQAVAIVAMCLQEEPEARPWISDVVTALSFLSTVPAEPIPPPLRPTATSVSKHSVATESEYDSETGSESEGESSDDAASSKNNENNISSQSQKKVSSKKSSRKSSSRSRSKTSSKDSADESASSSGKSSKKWQSFVGNISQKTNKSIKSSIKELSQKSSKKSSSKEKGQKSSRKSSKRGLSQKSSRKSSKRGLSAKSSADESMLSYQRTASSSQYTSSRMSDRSSRRGSGSVCSDINGSRRIEE* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1613 556 Pfam Protein kinase domain 68 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1613 556 MobiDBLite consensus disorder prediction 498 548 - -
Tpr1g1613 556 PANTHER RECEPTOR-LIKE KINASE LIP1 1 444 - -
Tpr1g1613 556 MobiDBLite consensus disorder prediction 466 482 - -
Tpr1g1613 556 SMART serkin_6 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1613 556 ProSiteProfiles Protein kinase domain profile. 66 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1613 556 MobiDBLite consensus disorder prediction 1 50 - -
Tpr1g1613 556 CDD STKc_IRAK 72 340 - -
Tpr1g1613 556 MobiDBLite consensus disorder prediction 353 556 - -
Tpr1g1613 556 MobiDBLite consensus disorder prediction 359 374 - -
Tpr1g1613 556 MobiDBLite consensus disorder prediction 384 407 - -
Tpr1g1613 556 Gene3D Phosphorylase Kinase; domain 1 36 142 - -
Tpr1g1613 556 PANTHER OS07G0668900 PROTEIN 1 444 - -
Tpr1g1613 556 SUPERFAMILY Protein kinase-like (PK-like) 52 373 IPR011009 -
Tpr1g1613 556 Gene3D Transferase(Phosphotransferase) domain 1 144 348 - -
Tpr1g1613 556 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Tpr1g1613 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Tpr1g1613 556 MobiDBLite consensus disorder prediction 483 497 - -
Tpr1g1613 556 MobiDBLite consensus disorder prediction 429 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1613 Tpr-Chr1 15119076 15127293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1613 1 418 Glycoside Hydrolase AT3G07070 52.315 2.71e-153 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tpr1g1613 Pkinase 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1613 - - lang:109335196 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1613 1 15119076 15127293 Tpr1g1613 1 15119076 15127293 ECH