Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1604 ATGGAGAGGAATGTATATGCATTGTTTGTGATGTTGTTGATATTTACTCTTGTTTTTTCTCTATCTGAAGAGCTTAATGCAGATGGAAAATATCTTATGGACATAAAAGTGAGATTGTTTGACAAATACAATCATCTTCAGAATTGGAATTCAAGTGATTCAACACCTTGCGGTTGGAAAGGTGTCATCTGCAACAATGACATCGATCCAGTAGTTGAATCTCTTGACTTGCATGCAATGAATCTCTCTGGCTCTTTGTCTTCCAGCATTGGCGGTTTGGTTCACTTGCTTCACCTTAACCTGTCTCAAAACACTTTCTCTGGTTTTATACCAAAGGAAATTGGAAACTGTTCAAGTTTGCAGGTTCTTGGTCTCAATATAAATGAGTTTAAAGGTCAAATTCCTGTCGAAATAGGCCGGCTTTCGAAGTTAACCGAATTGCATCTTTCCAACAACCAGCTCTCAGGACCTTTACCAGATGAAATTGGTAACCTTTCTTCACTCTCAATAGTTACTCTTTACACAAATCATCTTAGTGGTTGTTTGCCGCCTTCTATCGGGAACCTTAAAAGATTGATTCGGTTTCGAGCCGGGCAGAATATGCTCTCAGGAAGTCTACCTCAAGAGATAGGTGGATGTGAGAATTTGGAGTATCTTGGTTTAACTCAAAATCAGATAAGTGGTGAAATACCAAAAGAACTTGGTTTACTCAAGAACTTGCAATCCTTGGTCCTAAGGGAAAATAATCTTCATGGTGCTATACCTAAAGAGCTTGGAAACTGTATTAGTTTGGAGGTTCTTGCTCTCTATCAGAACCATCTTGTGGAAGAAATTCCAAAGGAGCTTGGAAAACTTGAATTCCTAAAGAGACTATACCTTTACAGAAATGAATTGACAGGAAATATTCCAAGGGAAATTGGAAATCTTTCTGTTGCAATTGAGATTGATTTTTCGGAGAATCTTCTAACAGGAGAGATACCGATCGAATTGGTTAATATAAAAGGGTTACAATTGCTTCATCTCTTCGAGAACAAGTTAACCGGTGCGATTCCAAATGAGTTCACCACATTGAAAAATCTAACTGAGTTGGATCTCTCTATTAATCATCTCAATGGTACTATTCCTATTGGATTTCAGGATTTGACCAAACTTACCTCTTTGCAACTCTTCAACAACTCATTAAGTGGTAGAATTCCTTATGCACTTGGAGCAAATAGTCCACTTTGGGTGCTTGATTTGTCATTAAACTTTTTGGTTGGAAGAATTCCAATTCATCTTTGTCAACTGTCTAAATTGATGATGTTGAACTTAGGATCAAACAAACTCGCCAGAAATGTACCTTATGGAATTACAACCTGCAAGTCTTTGGTGTATCTCCGCCTCTTCGGTAACAACTTGAGGGGCAAGTTTCCTTCTAATCTATGCAAGCTTGTCAATCTTTCTACAGTTGAGTTGGATCAGAATCAATTCACAGGTCCTATTCCTCCACAAGTTGGTTACTTCAAAAATTTGCAAAGACTTCACCTTTCTAACAACCATTTTTCATCTGAATTGCCGAAAGAAATCGGTAACCTCTCTCAGTTGGTCTCCTTTAATGTCTCATCAAACTATCTTTCGGGTAGAGTGCCTGTGGAACTTTTCAAATGCAAGAAGCTCCAAAGACTTGATCTCAGCGGCAACGACTTTGCAGGTACTTTATCAGGTGAGATAGGAACTCTTTCACAATTAGAGCTTCTCAGGCTCTCACATAACAACTTTTCTGGTAGTATTCCCTTGGAAGTCGGAAAACTCTTGCGGTTGACCGAGCTACAAATGAGCGAAAACTCATTTTGTGGTTACATTCCACAAGAATTAGGTTCCCTCTCATCCTTGCAAATTGCACTGAATCTCAGCTATAATAAACTTTCAGGCCAAATACCTTCTCAACTAGGGAATCTTATTATGCTAGAATCCCTTCAACTCAATAACAACCATTTGAGCGGCGAAATTCCAAATTCCTTCAACAGTCTTTCAAGTTTACTTTCCTTCAATTTCTCATACAATGATCTTATAGGCCCTTTACCTTCTTTACCTCTCTTTCAAAACTCCACATTCAGCTGCTTTTCAGGTAACAAAGGGCTATGTGGAGGACACCTTGTCCCTTGTCCAAATTCACCTTCACATTCCCCTCCAAATAAACTAGGAAAAATTTTAGCTATAGTTGCAGCTATTGTTAGTGGAGTTTCAATTGTTTTAATTCTAGCTATTATATATGTCATAAGAAATTTCACTGTGCCACAACAAGTCATAGATAAACCAAATTCTCCAAATGTTTCAAACATGTACTTTTTTCCAAAAGAGGACTTGAATTTCCAAGACATGGTTGAAGCTACTGAAAATTTTCATTCCAAATATGTAATTGGAAAAGGTGGCAGTGGAATTGTGTATAGAGCAGATATATCAACTGATGATCATGATCATACAAATATGAATACAATTGCTATAAAGAAGTTGACATCAAACTGTCACAGCATTGATGTAAATGGCTGCTTCCGTGCCGAAATCTTGACTTTGGGAAAAATAAGGCATAGAAATATTGTGAAATTATATGGTTTCTGCAACTATAGTGGCTCAAATATGCTACTTTATGAGTACATGGAAAAGGGTAGTTTGGGAGAGTTACTTCATGGAGAATCTTCCTCTAGTCTTGATTGGTATTCCAGGTTTCAGATTGCTCTAGGAACTGCACAAGGACTCTCTTATTTGCACCATGATTGCAAGCCTAGGATTATTCACCGCGACATCAAGTCCAATAACATACTTATTGATCATGAATTTGAAGCTCACGTTGGTGATTTCGGTTTGGCCAAGCTAATTGATATCTCAAAGTCTAAATCAATGTCTGCAGTTGTTGGTTCTTACGGCTACATTGCACCTGAGTATGCATACACAATGAAAGTCACAGAAAAATGTGATGTCTACAGCTATGGAGTAGTCCTATTGGAGTTACTAACAGGCAAGAAACCAGTCCAATCATTGGATCAAGGTGGTGGTGATCTTGTAACATGGGTCACAAATCATATCAACAAATATTCATTGAAACTAGACATCATTGATGCAAAATTGGACCTACTACATGAAATTGATGTTGCACAAATATTTGATGTCTTAAAAATTGCTTTACTATGCACTGACACGTCTCCTTCTAGAAGACCAAGTATGCGTAAAGTTGTTGCAATGCTTACAAGTTCTAGTAAAAGGAAAGAACAATCTTCTTCATTCTCACCATGTAATGAATCAAGTAACATAGAAGAATGA 3297 0.3761 MERNVYALFVMLLIFTLVFSLSEELNADGKYLMDIKVRLFDKYNHLQNWNSSDSTPCGWKGVICNNDIDPVVESLDLHAMNLSGSLSSSIGGLVHLLHLNLSQNTFSGFIPKEIGNCSSLQVLGLNINEFKGQIPVEIGRLSKLTELHLSNNQLSGPLPDEIGNLSSLSIVTLYTNHLSGCLPPSIGNLKRLIRFRAGQNMLSGSLPQEIGGCENLEYLGLTQNQISGEIPKELGLLKNLQSLVLRENNLHGAIPKELGNCISLEVLALYQNHLVEEIPKELGKLEFLKRLYLYRNELTGNIPREIGNLSVAIEIDFSENLLTGEIPIELVNIKGLQLLHLFENKLTGAIPNEFTTLKNLTELDLSINHLNGTIPIGFQDLTKLTSLQLFNNSLSGRIPYALGANSPLWVLDLSLNFLVGRIPIHLCQLSKLMMLNLGSNKLARNVPYGITTCKSLVYLRLFGNNLRGKFPSNLCKLVNLSTVELDQNQFTGPIPPQVGYFKNLQRLHLSNNHFSSELPKEIGNLSQLVSFNVSSNYLSGRVPVELFKCKKLQRLDLSGNDFAGTLSGEIGTLSQLELLRLSHNNFSGSIPLEVGKLLRLTELQMSENSFCGYIPQELGSLSSLQIALNLSYNKLSGQIPSQLGNLIMLESLQLNNNHLSGEIPNSFNSLSSLLSFNFSYNDLIGPLPSLPLFQNSTFSCFSGNKGLCGGHLVPCPNSPSHSPPNKLGKILAIVAAIVSGVSIVLILAIIYVIRNFTVPQQVIDKPNSPNVSNMYFFPKEDLNFQDMVEATENFHSKYVIGKGGSGIVYRADISTDDHDHTNMNTIAIKKLTSNCHSIDVNGCFRAEILTLGKIRHRNIVKLYGFCNYSGSNMLLYEYMEKGSLGELLHGESSSSLDWYSRFQIALGTAQGLSYLHHDCKPRIIHRDIKSNNILIDHEFEAHVGDFGLAKLIDISKSKSMSAVVGSYGYIAPEYAYTMKVTEKCDVYSYGVVLLELLTGKKPVQSLDQGGGDLVTWVTNHINKYSLKLDIIDAKLDLLHEIDVAQIFDVLKIALLCTDTSPSRRPSMRKVVAMLTSSSKRKEQSSSFSPCNESSNIEE* 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1604 1098 Gene3D Transferase(Phosphotransferase) domain 1 879 1095 - -
Tpr1g1604 1098 ProSitePatterns Protein kinases ATP-binding region signature. 800 830 IPR017441 GO:0005524
Tpr1g1604 1098 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Tpr1g1604 1098 Gene3D Ribonuclease Inhibitor 184 311 IPR032675 -
Tpr1g1604 1098 SMART serkin_6 794 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1604 1098 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Tpr1g1604 1098 Pfam Leucine rich repeat 335 394 IPR001611 GO:0005515
Tpr1g1604 1098 ProSiteProfiles Protein kinase domain profile. 794 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1604 1098 Pfam Protein tyrosine and serine/threonine kinase 797 1073 IPR001245 GO:0004672|GO:0006468
Tpr1g1604 1098 SUPERFAMILY RNI-like 74 418 - -
Tpr1g1604 1098 PANTHER LRR RECEPTOR-LIKE KINASE 8 1086 - -
Tpr1g1604 1098 SUPERFAMILY Protein kinase-like (PK-like) 768 1074 IPR011009 -
Tpr1g1604 1098 Gene3D Ribonuclease Inhibitor 404 719 IPR032675 -
Tpr1g1604 1098 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Tpr1g1604 1098 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Tpr1g1604 1098 SMART LRR_typ_2 573 597 IPR003591 -
Tpr1g1604 1098 SMART LRR_typ_2 501 525 IPR003591 -
Tpr1g1604 1098 SMART LRR_typ_2 93 117 IPR003591 -
Tpr1g1604 1098 SMART LRR_typ_2 141 165 IPR003591 -
Tpr1g1604 1098 SMART LRR_typ_2 237 261 IPR003591 -
Tpr1g1604 1098 SMART LRR_typ_2 429 453 IPR003591 -
Tpr1g1604 1098 SMART LRR_typ_2 381 405 IPR003591 -
Tpr1g1604 1098 SMART LRR_typ_2 357 380 IPR003591 -
Tpr1g1604 1098 SMART LRR_typ_2 646 669 IPR003591 -
Tpr1g1604 1098 SMART LRR_typ_2 285 309 IPR003591 -
Tpr1g1604 1098 Gene3D Phosphorylase Kinase; domain 1 759 878 - -
Tpr1g1604 1098 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1086 - -
Tpr1g1604 1098 SUPERFAMILY L domain-like 451 715 - -
Tpr1g1604 1098 Gene3D Ribonuclease Inhibitor 313 400 IPR032675 -
Tpr1g1604 1098 MobiDBLite consensus disorder prediction 1075 1098 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1604 Tpr-Chr1 15027605 15032154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1604 19 1074 Receptor kinase-like Gene Family AT5G56040 37.828 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr1g1604 PK_Tyr_Ser-Thr 6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1604 - - adu:107465566 1458.35