Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1594 ATGGCGAACCGGTGGTGGACCGGACCGGTAGGTCTAGGTGGGATGGACAACTCAGTAACTTCCTCCCCACTTCAAAAACCAGATCTGGGTTTCTCCATGAATGGAAGTGCCATTACAGGAGGAGGTTTGAACAACAACAATAATAACAACAACAACAACAACAACAACAACAACGAAGATCAAGATGAGAAAGAAAACAGCGACGAACAAAAAGGAGGAGGAATCGAAACAAACACATCGACGCGCCGTCCAAGAGGACGACCATCAGGATCAAAAAATAAACCAAAACCACCAATATTCATAACAAGAGATAGCCCTAATGCACTTAGAAGTCACGTAATGGAAGTAGCAACAGGAACAGACATATCAGATTGTGTTATTCAGTTTGCTAGAAAAAGACAGAGAGGTATTTGCATTCTAAGTGCAAGTGGAACCGTCGTTAATGTTTCTCTCCGGCAACCTACAGGTCCTGGAGCTGTGGTGGCTCTTCCTGGTAGATTTGATATTCTATCGTTAACTGGTTCTGTTCTTCCTGGACCTTCACCTCCTGGTGCTACTGGTTTGACTATTTATCTTTCTGGAGGTCAGGGACAGGTCGTCGGCGGTGGTGTTGTTGGGCCGCTGGTGGCGGCTGGACCGGTTATGTTGATGGCAGCGACTTTTTCAAATGCTACTTATGAGAGGTTGCCTGTTGAAGATGGTGATGATCAGGAGCAAGGACAGGGTGGTGGTGGTGATGATGAGTCTCCGACTGCTGCGGGGATGGGACAGTTACCGGGTGGATCTGTCGGAGAAGGTTCGTCGGTTTATAATAATTTGGGTGTTACAAATGGAGGACAACAACAGTTGTTGAATAATCATGAAGCTTATAATAATTCTCCTTGGAGTCATGGTAGAACACCATACTAA 909 0.4576 MANRWWTGPVGLGGMDNSVTSSPLQKPDLGFSMNGSAITGGGLNNNNNNNNNNNNNNNEDQDEKENSDEQKGGGIETNTSTRRPRGRPSGSKNKPKPPIFITRDSPNALRSHVMEVATGTDISDCVIQFARKRQRGICILSASGTVVNVSLRQPTGPGAVVALPGRFDILSLTGSVLPGPSPPGATGLTIYLSGGQGQVVGGGVVGPLVAAGPVMLMAATFSNATYERLPVEDGDDQEQGQGGGGDDESPTAAGMGQLPGGSVGEGSSVYNNLGVTNGGQQQLLNNHEAYNNSPWSHGRTPY* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1594 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 8 302 - -
Tpr1g1594 302 MobiDBLite consensus disorder prediction 58 106 - -
Tpr1g1594 302 MobiDBLite consensus disorder prediction 259 302 - -
Tpr1g1594 302 Gene3D - 109 238 - -
Tpr1g1594 302 Pfam Plants and Prokaryotes Conserved (PCC) domain 110 223 IPR005175 -
Tpr1g1594 302 ProSiteProfiles PPC domain profile profile. 106 241 IPR005175 -
Tpr1g1594 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 302 IPR014476 GO:0003680
Tpr1g1594 302 SUPERFAMILY AF0104/ALDC/Ptd012-like 106 233 - -
Tpr1g1594 302 PIRSF ESCAROLA 34 302 IPR014476 GO:0003680
Tpr1g1594 302 CDD DUF296 110 193 IPR005175 -
Tpr1g1594 302 MobiDBLite consensus disorder prediction 264 302 - -
Tpr1g1594 302 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1594 Tpr-Chr1 14844399 14846231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1594 1 231 AT-hook Motif Nuclear Localized (AHL) Family AT3G04570 62.500 2.58e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1594 - - qsu:112038015 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1594 1 14844399 14846231 Tpr1g1594 1 14844399 14846231 ECH