Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1556 ATGACAATTTATAAAAGTGCATGTATACTGTTTGTTATAATGTGTATACCAATTTTGTTGAATGCACAAAGCAACAAAGATGAATCTTTTATATTAGGTTGTGGTTTAGGTGAAAATGGTGGCAAAGATTCAGATGGAAGACAATGGAATCCAGATAACAAATATGTATCAGGTGGAAATTCAGTAACAGCAAAAGCTTCATTTCAAGATCCTTCACTTTTATCAGAAGTTCCATACATGACTGCAAGAATTTTCACATCGGAAACAACCTACAAATTGCCGATTCAACCCGATAAACGTTATTGGTTAAGACTTCATTTTTATCCATCTGTTTATAACAATTTCAACCCAGTAGATTCATATTTTTCTGTAACAGCAAATGGTGTTACACTTCTAAACAATTTCAGCTCCTATATTACATGTCAAGCCTTATCACAAGCTTATATTGATAGAGAATATTCACTTTCACCTTTGAATTCAGATGTTCTTGAACTTAAATTCAAACCTTCTGATAAACATAATGGTGCTTTTGCTTTTGTTAATGGTATTCAGCTTATTCAAATGCCGGATTTGTTATTTGATTCGCCTTCGTTGGTCGGTTATCCAGACCAAACCGTGGATGCTAAAAGTATGCATATGCAAACCATGTTTAGATTAAATGTTGGTGGGCAATATATACCTCCGGTTCAGGATTCTGGTTTGAGTCGAACATGGTACGATGATACACCTTACATTTTTGGCGCAGCCGTCGGTGTTACAAACCAAGCCGAGAAGAATGTTACAATTGATTATCAAGCAATGCCTAAATACATTGCTCCTACCGATGTTTATTCAACTTCAAGATCCATGGGAACTAATAAAGATGTCAACATGGGATTCAATCTCACATGGGTTTTTCAAGTTGATCCGAATTCTATGTACCTTACAAGATTACATTTTTGTGATTACCATTATTTGCAATCGAACGAGATTGTTTTCAGTATCTTCGTTAACAATCAAACAGCGCAGGATCAAGCCGATGTGATCGGTTGGACAGGAAGACAAGGAGCGACGACTTATAAGGATTATGTGGTTTATGTTCATGAAGAGGCGGGTGATGATCAACTTTGGCTTGCATTGCATCCAAATCCCACTACAAAGCCGAGATTTTACGATGCTATGCTCAATGGTGTTGAGATATTCAAACTCAATGATACTGATTTGTCTGGACCAAATCCTCAACCTTCTGATATGATGATGGAGTATGAGGCAAGGATAAGAAATTTTGAAGACAAAAATGGCCATAGTAGGAGTTTTGCTATTGGTGGAGCTGCCGGAGGTGCTGCAGGTTTTGCATTAGTTGCTGCTATATGCATTGCTGTTCATCAAAGGAAGAAGAGAACACCAGGTTCATACACAAACTCCACATCAAGTTGGTTACCTCTCTATGGATCACACACAACCGGAACGAAATCCACATCAGGAAAAAGTACGATGGGTAGTGGTGCAAACTTAGCCATGGCTCAAGGACTATGTCGATATTTCTCTTTACAAGAGATGAGGCACGCAACCAATAATTTTGAAGAGTCCAATGTTATTGGGGTAGGAGGATTTGGAAAAGTTTACAAGGGTGTTATTGATAATGGTTTTAAAGTGGCTATTAAGAGATCAAATCCACAATCAGAACAAGGAGTGAATGAATTTCAGACGGAAATTGAGATGCTTTCAAAGCTTAGACATAAACATTTGGTGTCTTTAATTGGTTTTTGTGAGGAAGGTGAGGAAATGTGTTTGGTTTATGATTACATGGCCCATGGAACCATGAGGGAACATTTATACAAAGGAAACAAACCGATAGATACATTATCATGGAAACAAAGGTTAGAGATTTGTATTGGTGCTGCAAGAGGTCTTCATTACCTTCACACAGGAGCAAAGTACACTATAATTCATAGAGATGTCAAAACAACCAACATTCTACTTGATGAAAATTTTGTTGCCAAGGTTTCAGATTTTGGTTTGTCAAAAACAGGTCCAGATATGAACCAGGGTCATGTTAGTACAGTAGTAAAAGGTAGTTTTGGTTATTTGGATCCTGAATATTTCAGGAGACAACAATTGACTGAAAAATCCGATGTTTACTCTTTCGGTGTTGTTCTATTCGAGGCATTGTGTTCAAGACCTGCTTTAAATCCTAGTCTTCCAAAGGAACAAGTTAGTCTTGCAGATTGGGCTTTGATGAACAAAAGAAAAGGAACATTGGAGGATATTATTGATCCAAATCTAAAAGGAAAAATCAAACCTGAAAGCTTGAATAAGTTTGCAGATACAGCTGAAAAGTGTTTGTCTGATTCTGGACTCGATCGTCCCTCGATGAATGATCTATTGTGGAATCTTGAATTTGCTCTTAACCTACAAGAAAACGATGGTACTTCAAGTTCAACTCATAACAACTCTGCACATATAGATGAGAGTGATTTTGAAGAGGTGAATTTGAATCAACGTAATGACATGGCGGCACATTACAAAAACCTTAGCCTTGGAAGTGAACATGACCTTAGTCATGACTCAGCTGGGAATTCTTCTGCCATTTTCTCTCAAATTGGCAATCCAAAAGGGCGATGA 2604 0.3744 MTIYKSACILFVIMCIPILLNAQSNKDESFILGCGLGENGGKDSDGRQWNPDNKYVSGGNSVTAKASFQDPSLLSEVPYMTARIFTSETTYKLPIQPDKRYWLRLHFYPSVYNNFNPVDSYFSVTANGVTLLNNFSSYITCQALSQAYIDREYSLSPLNSDVLELKFKPSDKHNGAFAFVNGIQLIQMPDLLFDSPSLVGYPDQTVDAKSMHMQTMFRLNVGGQYIPPVQDSGLSRTWYDDTPYIFGAAVGVTNQAEKNVTIDYQAMPKYIAPTDVYSTSRSMGTNKDVNMGFNLTWVFQVDPNSMYLTRLHFCDYHYLQSNEIVFSIFVNNQTAQDQADVIGWTGRQGATTYKDYVVYVHEEAGDDQLWLALHPNPTTKPRFYDAMLNGVEIFKLNDTDLSGPNPQPSDMMMEYEARIRNFEDKNGHSRSFAIGGAAGGAAGFALVAAICIAVHQRKKRTPGSYTNSTSSWLPLYGSHTTGTKSTSGKSTMGSGANLAMAQGLCRYFSLQEMRHATNNFEESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEGEEMCLVYDYMAHGTMREHLYKGNKPIDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENFVAKVSDFGLSKTGPDMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCSRPALNPSLPKEQVSLADWALMNKRKGTLEDIIDPNLKGKIKPESLNKFADTAEKCLSDSGLDRPSMNDLLWNLEFALNLQENDGTSSSTHNNSAHIDESDFEEVNLNQRNDMAAHYKNLSLGSEHDLSHDSAGNSSAIFSQIGNPKGR* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1556 867 Gene3D Phosphorylase Kinase; domain 1 481 595 - -
Tpr1g1556 867 PANTHER OS07G0166700 PROTEIN 21 854 IPR045272 GO:0004714|GO:0006468
Tpr1g1556 867 Pfam Malectin-like domain 33 395 IPR024788 -
Tpr1g1556 867 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Tpr1g1556 867 Gene3D Transferase(Phosphotransferase) domain 1 596 820 - -
Tpr1g1556 867 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 21 854 - -
Tpr1g1556 867 SUPERFAMILY Protein kinase-like (PK-like) 500 795 IPR011009 -
Tpr1g1556 867 SMART serkin_6 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1556 867 CDD STKc_IRAK 526 793 - -
Tpr1g1556 867 Pfam Protein tyrosine and serine/threonine kinase 523 789 IPR001245 GO:0004672|GO:0006468
Tpr1g1556 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Tpr1g1556 867 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1556 867 Gene3D - 31 189 - -
Tpr1g1556 867 Gene3D - 211 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1556 Tpr-Chr1 14405051 14408696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1556 13 867 Receptor kinase-like Gene Family AT3G51550 52.252 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr1g1556 Malectin_like 1.2e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1556 - - gmx:100791236 1345.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0163 6 1394762 1398448 Tpr1g1556 1 14405051 14408696 PCT