Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g1556 | ATGACAATTTATAAAAGTGCATGTATACTGTTTGTTATAATGTGTATACCAATTTTGTTGAATGCACAAAGCAACAAAGATGAATCTTTTATATTAGGTTGTGGTTTAGGTGAAAATGGTGGCAAAGATTCAGATGGAAGACAATGGAATCCAGATAACAAATATGTATCAGGTGGAAATTCAGTAACAGCAAAAGCTTCATTTCAAGATCCTTCACTTTTATCAGAAGTTCCATACATGACTGCAAGAATTTTCACATCGGAAACAACCTACAAATTGCCGATTCAACCCGATAAACGTTATTGGTTAAGACTTCATTTTTATCCATCTGTTTATAACAATTTCAACCCAGTAGATTCATATTTTTCTGTAACAGCAAATGGTGTTACACTTCTAAACAATTTCAGCTCCTATATTACATGTCAAGCCTTATCACAAGCTTATATTGATAGAGAATATTCACTTTCACCTTTGAATTCAGATGTTCTTGAACTTAAATTCAAACCTTCTGATAAACATAATGGTGCTTTTGCTTTTGTTAATGGTATTCAGCTTATTCAAATGCCGGATTTGTTATTTGATTCGCCTTCGTTGGTCGGTTATCCAGACCAAACCGTGGATGCTAAAAGTATGCATATGCAAACCATGTTTAGATTAAATGTTGGTGGGCAATATATACCTCCGGTTCAGGATTCTGGTTTGAGTCGAACATGGTACGATGATACACCTTACATTTTTGGCGCAGCCGTCGGTGTTACAAACCAAGCCGAGAAGAATGTTACAATTGATTATCAAGCAATGCCTAAATACATTGCTCCTACCGATGTTTATTCAACTTCAAGATCCATGGGAACTAATAAAGATGTCAACATGGGATTCAATCTCACATGGGTTTTTCAAGTTGATCCGAATTCTATGTACCTTACAAGATTACATTTTTGTGATTACCATTATTTGCAATCGAACGAGATTGTTTTCAGTATCTTCGTTAACAATCAAACAGCGCAGGATCAAGCCGATGTGATCGGTTGGACAGGAAGACAAGGAGCGACGACTTATAAGGATTATGTGGTTTATGTTCATGAAGAGGCGGGTGATGATCAACTTTGGCTTGCATTGCATCCAAATCCCACTACAAAGCCGAGATTTTACGATGCTATGCTCAATGGTGTTGAGATATTCAAACTCAATGATACTGATTTGTCTGGACCAAATCCTCAACCTTCTGATATGATGATGGAGTATGAGGCAAGGATAAGAAATTTTGAAGACAAAAATGGCCATAGTAGGAGTTTTGCTATTGGTGGAGCTGCCGGAGGTGCTGCAGGTTTTGCATTAGTTGCTGCTATATGCATTGCTGTTCATCAAAGGAAGAAGAGAACACCAGGTTCATACACAAACTCCACATCAAGTTGGTTACCTCTCTATGGATCACACACAACCGGAACGAAATCCACATCAGGAAAAAGTACGATGGGTAGTGGTGCAAACTTAGCCATGGCTCAAGGACTATGTCGATATTTCTCTTTACAAGAGATGAGGCACGCAACCAATAATTTTGAAGAGTCCAATGTTATTGGGGTAGGAGGATTTGGAAAAGTTTACAAGGGTGTTATTGATAATGGTTTTAAAGTGGCTATTAAGAGATCAAATCCACAATCAGAACAAGGAGTGAATGAATTTCAGACGGAAATTGAGATGCTTTCAAAGCTTAGACATAAACATTTGGTGTCTTTAATTGGTTTTTGTGAGGAAGGTGAGGAAATGTGTTTGGTTTATGATTACATGGCCCATGGAACCATGAGGGAACATTTATACAAAGGAAACAAACCGATAGATACATTATCATGGAAACAAAGGTTAGAGATTTGTATTGGTGCTGCAAGAGGTCTTCATTACCTTCACACAGGAGCAAAGTACACTATAATTCATAGAGATGTCAAAACAACCAACATTCTACTTGATGAAAATTTTGTTGCCAAGGTTTCAGATTTTGGTTTGTCAAAAACAGGTCCAGATATGAACCAGGGTCATGTTAGTACAGTAGTAAAAGGTAGTTTTGGTTATTTGGATCCTGAATATTTCAGGAGACAACAATTGACTGAAAAATCCGATGTTTACTCTTTCGGTGTTGTTCTATTCGAGGCATTGTGTTCAAGACCTGCTTTAAATCCTAGTCTTCCAAAGGAACAAGTTAGTCTTGCAGATTGGGCTTTGATGAACAAAAGAAAAGGAACATTGGAGGATATTATTGATCCAAATCTAAAAGGAAAAATCAAACCTGAAAGCTTGAATAAGTTTGCAGATACAGCTGAAAAGTGTTTGTCTGATTCTGGACTCGATCGTCCCTCGATGAATGATCTATTGTGGAATCTTGAATTTGCTCTTAACCTACAAGAAAACGATGGTACTTCAAGTTCAACTCATAACAACTCTGCACATATAGATGAGAGTGATTTTGAAGAGGTGAATTTGAATCAACGTAATGACATGGCGGCACATTACAAAAACCTTAGCCTTGGAAGTGAACATGACCTTAGTCATGACTCAGCTGGGAATTCTTCTGCCATTTTCTCTCAAATTGGCAATCCAAAAGGGCGATGA | 2604 | 0.3744 | MTIYKSACILFVIMCIPILLNAQSNKDESFILGCGLGENGGKDSDGRQWNPDNKYVSGGNSVTAKASFQDPSLLSEVPYMTARIFTSETTYKLPIQPDKRYWLRLHFYPSVYNNFNPVDSYFSVTANGVTLLNNFSSYITCQALSQAYIDREYSLSPLNSDVLELKFKPSDKHNGAFAFVNGIQLIQMPDLLFDSPSLVGYPDQTVDAKSMHMQTMFRLNVGGQYIPPVQDSGLSRTWYDDTPYIFGAAVGVTNQAEKNVTIDYQAMPKYIAPTDVYSTSRSMGTNKDVNMGFNLTWVFQVDPNSMYLTRLHFCDYHYLQSNEIVFSIFVNNQTAQDQADVIGWTGRQGATTYKDYVVYVHEEAGDDQLWLALHPNPTTKPRFYDAMLNGVEIFKLNDTDLSGPNPQPSDMMMEYEARIRNFEDKNGHSRSFAIGGAAGGAAGFALVAAICIAVHQRKKRTPGSYTNSTSSWLPLYGSHTTGTKSTSGKSTMGSGANLAMAQGLCRYFSLQEMRHATNNFEESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEGEEMCLVYDYMAHGTMREHLYKGNKPIDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENFVAKVSDFGLSKTGPDMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCSRPALNPSLPKEQVSLADWALMNKRKGTLEDIIDPNLKGKIKPESLNKFADTAEKCLSDSGLDRPSMNDLLWNLEFALNLQENDGTSSSTHNNSAHIDESDFEEVNLNQRNDMAAHYKNLSLGSEHDLSHDSAGNSSAIFSQIGNPKGR* | 868 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g1556 | 867 | Gene3D | Phosphorylase Kinase; domain 1 | 481 | 595 | - | - | |
Tpr1g1556 | 867 | PANTHER | OS07G0166700 PROTEIN | 21 | 854 | IPR045272 | GO:0004714|GO:0006468 | |
Tpr1g1556 | 867 | Pfam | Malectin-like domain | 33 | 395 | IPR024788 | - | |
Tpr1g1556 | 867 | ProSitePatterns | Protein kinases ATP-binding region signature. | 526 | 548 | IPR017441 | GO:0005524 | |
Tpr1g1556 | 867 | Gene3D | Transferase(Phosphotransferase) domain 1 | 596 | 820 | - | - | |
Tpr1g1556 | 867 | PANTHER | MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN | 21 | 854 | - | - | |
Tpr1g1556 | 867 | SUPERFAMILY | Protein kinase-like (PK-like) | 500 | 795 | IPR011009 | - | |
Tpr1g1556 | 867 | SMART | serkin_6 | 520 | 795 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g1556 | 867 | CDD | STKc_IRAK | 526 | 793 | - | - | |
Tpr1g1556 | 867 | Pfam | Protein tyrosine and serine/threonine kinase | 523 | 789 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g1556 | 867 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 642 | 654 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g1556 | 867 | ProSiteProfiles | Protein kinase domain profile. | 520 | 795 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g1556 | 867 | Gene3D | - | 31 | 189 | - | - | |
Tpr1g1556 | 867 | Gene3D | - | 211 | 397 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g1556 | Tpr-Chr1 | 14405051 | 14408696 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g1556 | 13 | 867 | Receptor kinase-like Gene Family | AT3G51550 | 52.252 | 0.0 | 854 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Tpr1g1556 | Malectin_like | 1.2e-36 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g1556 | - | - | gmx:100791236 | 1345.49 |