Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1546 ATGCAAAGGTATGATATAATTTTAGGCACGACAAGAGGTTTGGCCTATCTGCACGAGGATTTCCATGTTTGTATTATACATAGGGATATAAAGACTGGCAACATTCTCTTAGACGATGATCTTCAGCCTAAAATTGCTGATTTTGGGTTGGCAAGGCTTTTACCAGAAGATCAATCTCATCTTAGCACAAGATTTGCAGGAACATTGGGATATACACTGCACCAGAATATGCAATACATGATTGTTGGAGATAATATGCAAGGTGCTGTGTTTGGAGAGCTGCTAGATTGCCTCTTGAAACCTACAAACATCAAAGAGAAAACATCAAGCTTGATGCTACTTGCATCTCTTGGAAGCGAATGTGAGGAAACTATGTTAAAACAATTGATGTTGTTGGAGTTTGGCAAGAGAACAATGTTGTTGAAACTGAAAAGGCCATTGAAGCTCTTAAAAGAGTTGCATAGTAAATTTAGAAAAGTTCTTAGAATTGATGTTATTCTTGTTGTATAA 510 0.3686 MQRYDIILGTTRGLAYLHEDFHVCIIHRDIKTGNILLDDDLQPKIADFGLARLLPEDQSHLSTRFAGTLGYTLHQNMQYMIVGDNMQGAVFGELLDCLLKPTNIKEKTSSLMLLASLGSECEETMLKQLMLLEFGKRTMLLKLKRPLKLLKELHSKFRKVLRIDVILVV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1546 169 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 73 - -
Tpr1g1546 169 SUPERFAMILY Protein kinase-like (PK-like) 2 72 IPR011009 -
Tpr1g1546 169 Pfam Protein kinase domain 5 71 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1546 169 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 2 73 - -
Tpr1g1546 169 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Tpr1g1546 169 Gene3D Transferase(Phosphotransferase) domain 1 1 85 - -
Tpr1g1546 169 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1546 Tpr-Chr1 14331015 14335343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1546 2 109 Receptor kinase-like Gene Family AT1G70520 50.459 1.13e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr1g1546 Pkinase 1.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1546 - - vun:114187094 140.969