Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1540 ATGGATAGGGTATTCTCCGTGGACGAAATTCCCGACCACTTATGGTCGCCGCAGATTCACGATTCCGGCGGCGCCACCGAAGAATCTTCCAACATGAGTCGCAGCGCTTCCGAATGGGCTTTTCAACGCTTTCTTCAAGAAGCTGCTACATCTCCCCTTTCTTCCTCTGTTGCTGATGAAAACGTCGTAGATACCCCACCTCTTCCAACGAAGGACGATGCCGCCGTTTTGAAAAATGGTCCTCCGCCTCCACATCCTCCTCCGGTGACCGTTGATTCGGAGGAATATCGTCGAGCTGTGTTGAAGAGTAAGCTGAGTCTTGCCTGTGCTGCTGTTGCCATGACTAGGGGATCTTTGACTAAATCTCAAGATCTAGCCACTTTTTCTGAGAATGGATCACAGTCGTCTAATCCTACTCAAGTTGGACCTCAGCCCAGTTTTGAAGGATCTGCTCGTCCTGGAAATGATCCACCTATATTACAAGATAAAGATGCCAAAGTACCACCTGCGATCCCTTCCATACCTCCTGTCCAGAAAAAAACTGTTGTTGCAACTAGGCCATCAACAAGTGGATCATCAAGAGAACTGTCAGATGATGACGAAGCTGAGGGAGAGACATATATGAATGACAACACAGACCCTACTGATGTAAAACGAGTAAGGAGGATGCTTTCCAATAGAGAGTCAGCTAGACGCTCAAGACGAAGAAAGCAGGCTCATTTAACTGAGTTGGAAACACAGGTTTCTCAATTACGAGGCGAAAATTCTTCCTTGGTAAAACGCCTCACTGATGTGAGCCAAAAGTACACTGACTCTGCTGTTGACAACAGAGTACTGAAAGCTGATGTCGAAACGTTAAGAGCAAAGGTGAAGATGGCTGAAGAGACCGTCAAAAGAATTACCGGATTGAACCCGATGTTTCATGTGATGCCTCCTGATATATCATCGATGGGCATGCCATCCTTTGATGGAAGCCCTTCAGACAATTCAGCTGATGCGGCTGTCCCTGTGCAAGACGATCCACATCATCACTTCTATCAACCCGCATCAAATAATCCTATGCCGTGTCATGATATGAGAGTCAACAATGGGTTGGGAGACATTTCATCAATTGAAAATGTACAGCAGAATAATGCAGCAGTTGTAGGTGGCAACAAGATGGGTCAAACAGCTTCTCCCTTGCACCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTCGATTCTTGTGGACCATCTTCTAATGGAGAGCAGTAA 1269 0.4689 MDRVFSVDEIPDHLWSPQIHDSGGATEESSNMSRSASEWAFQRFLQEAATSPLSSSVADENVVDTPPLPTKDDAAVLKNGPPPPHPPPVTVDSEEYRRAVLKSKLSLACAAVAMTRGSLTKSQDLATFSENGSQSSNPTQVGPQPSFEGSARPGNDPPILQDKDAKVPPAIPSIPPVQKKTVVATRPSTSGSSRELSDDDEAEGETYMNDNTDPTDVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLVKRLTDVSQKYTDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFHVMPPDISSMGMPSFDGSPSDNSADAAVPVQDDPHHHFYQPASNNPMPCHDMRVNNGLGDISSIENVQQNNAAVVGGNKMGQTASPLHRVASLEHLQKRIRGGVDSCGPSSNGEQ* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1540 422 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Tpr1g1540 422 Pfam Basic leucine-zipper C terminal 285 411 IPR020983 -
Tpr1g1540 422 PANTHER BASIC LEUCINE ZIPPER 63 1 403 - -
Tpr1g1540 422 Pfam bZIP transcription factor 217 268 IPR004827 GO:0003700|GO:0006355
Tpr1g1540 422 SUPERFAMILY Leucine zipper domain 218 269 IPR046347 GO:0003700|GO:0006355
Tpr1g1540 422 MobiDBLite consensus disorder prediction 124 146 - -
Tpr1g1540 422 Coils Coil 276 296 - -
Tpr1g1540 422 MobiDBLite consensus disorder prediction 124 215 - -
Tpr1g1540 422 PANTHER BZIP TRANSCRIPTION FACTOR 1 403 - -
Tpr1g1540 422 MobiDBLite consensus disorder prediction 1 36 - -
Tpr1g1540 422 CDD bZIP_plant_GBF1 219 269 IPR045314 GO:0003700|GO:0006355
Tpr1g1540 422 MobiDBLite consensus disorder prediction 50 93 - -
Tpr1g1540 422 Gene3D - 217 272 - -
Tpr1g1540 422 MobiDBLite consensus disorder prediction 22 36 - -
Tpr1g1540 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 268 IPR004827 GO:0003700|GO:0006355
Tpr1g1540 422 Coils Coil 227 261 - -
Tpr1g1540 422 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 221 236 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1540 Tpr-Chr1 14249262 14255525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1540 1 307 bZIP Transcription Factor Family AT4G02640 41.337 4.60e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr1g1540 bZIP_C 8.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1540 K25784 - gmx:100170702 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1540 1 14249262 14255525 Tpr1g1540 1 14249262 14255525 ECH
Tpr6g0171 6 1442568 1445933 Tpr1g1540 1 14249262 14255525 PCT