Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1533 ATGGCTGATTCTTCAACAAACCCAAAGGATCAACAAAATACACGTCTCTATCATCCCTACCAACACCTCAACATCCCCGTCGATAAACTCTACAACCTCCCCATCTCACCAGAACATCTTTTCCCCGAAGAAGCTTCCAGAAAGCACCGATCATGGGGCGACAATCTCCAGTACTACACCGGCACCGGCTACTTATCCGGCGCGATCATCGGAGGTGTCAGGGGAACTGTAGAAGGTCTCAAGGCTTCTGAGTCTGGTGAGTCTCTTAAGCTCCGAGTTAATCGAGTTCTTAACTCGGGTGGTCAAGGAGGTCGTAGATTTGGTAACTCGCTTGGCGTGTTGGGATTGATCTTTGCGGGATTGGAGAGTGGTATGATCCACTTTAGAGATACGGATGATTTGGTCAATAGCGCTGTTGCCGGACTTGGTACCGGAGCGCTTTATAAGGCTGCTGCCGGTCCCCGATCAGCTGCTATTGCTGGTGCTATCGGGGGAATTGCGGCAGCTGTGGCAGTTGCCGGGAAACAGGCTTTGAAACGACATATTCCGATATAA 555 0.5063 MADSSTNPKDQQNTRLYHPYQHLNIPVDKLYNLPISPEHLFPEEASRKHRSWGDNLQYYTGTGYLSGAIIGGVRGTVEGLKASESGESLKLRVNRVLNSGGQGGRRFGNSLGVLGLIFAGLESGMIHFRDTDDLVNSAVAGLGTGALYKAAAGPRSAAIAGAIGGIAAAVAVAGKQALKRHIPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1533 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 2 184 - -
Tpr1g1533 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 166 - -
Tpr1g1533 184 PANTHER TIM23 2 184 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1533 Tpr-Chr1 14109334 14110408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1533 3 180 Chloroplast and Mitochondria Gene Families AT1G17530 54.444 1.17e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1533 K17794 - gmx:100803835 268.085