Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1526 ATGAATGGAGTAACACACCTTGAAGAAGGTGACTCTGAGTTTGTTGAAGTTGATCCAACTGGAAGATATGGCAGATACAATGAAATCCTTGGCAAAGGAGCTTCAAAAACAGTATATAAGGCATTTGATGAGTATGAAGGGATTGAAGTTGCTTGGAATCAGGTCAAGTTGTATGATTTCCTACAAAGTCCTGAAGATCTTGAAAGGCTTTACTGTGAAATTCATCTTTTGAAAACATTGAAACACCAAAACATTATGAAATTTTATACCTCTTGGGTTGATACTGCTAATAGGAACATTAATTTTGTTACTGAAATGTTCACTTCTGGTACACTTAGACAGTATAGGCAAAAGCACAAAAGAGTTAACATAAGAGCGGTCAAGCATTGGTGCATACAGATCCTGAGAGGACTTCTTTATCTACATAGCCATGACCCGCCAGTGATCCATAGAGATCTCAAATGTGATAACATTTTTATTAATGGAAATCAAGGAGAAGTCAAAATTGGGGATCTTGGTCTAGCCGCAATTCTTCGGAAATCTCATGCCGCGCATTGTGTTGGAACGCCCGAGTTCATGGCACCAGAAGTATATGAAGAATCGTATAATGAACTAGTCGACATATATTCCTTTGGGATGTGCATATTAGAGATGGTCACATTTGAATATCCTTATAGCGAATGCACACATCCAGCTCAAATATACAAGAAAGTTATGTCTGGGAAAAAGCCAGATGCTTTGTATAAAGTTAAGGATCCGGAAGTGCGGCAATTTGTTGATAAATGCTTGGCCACAGTGTCTCTAAGACTTTCTGCTAGGGAGCTTCTCGATGACCCTTTTCTTCAAATCGATGATTATGAATATGATTTGAAACCTGTAGACAGTGGAGAATTTGATGACTTTGGTCCCCTCTTCAGGCAGCCGCTCTACGATCTTCATCGAGGCTTTAGTAACTTCAGTAATGAATACTCAAATGGCTGTGGTTATGAAGGAGACTCGTATGTGCATCCGGCTGATAATGAAGTTTGTGGAATTGAACTTTTTGAGCACCATGATGACGACGAACCCTCTGAACATGTGGACATAAGTATCAAGGGAAAGAAGAAAGAAGACGGCGGCATATTTTTGAGACTAAGAATTTCTGATAAAGAAGGCCACATTCGGAATATTTATTTCCCATTTGACATAGAGCAGGACACAGCCATAAGTGTGGCGACTGAGATGGTTGGAGAACTTGACATTACCGATCAGGATGTTACCAGTATAGCAGATATGATAGACGGGGAAATCGCTTCCTTGGTACCTGAATGGGAATCCGGACCAGGAATCGTCGAAACTCCCCGTTTTGCAAATCAAGGTTTCTGCCGCAATTGTGTGTCTAATCATACTTCAAGTGGCTCCCTCATGGAGTTTCTTTCACATAATCAGGGTAACTTGCAACTTCCTGAATGTTGTAAGCACGGATGTGCTTCAATGCACGGCCGGTTCGAGGAGATTACGTTCCCATCCGAGGAGTATGACAATCATGTTAGAGAGAATCTGAACATATCAAACCGATCGGATGGCTTGCAATATCAGGAGCTATGGAATCAGCATGAAAGCCGTGAACTGAGTCCGATAGAGTCAGATCAAAGTCATTCTGATGAACAAAATGAACAAATAGATAAATCAATATTAGCTGAAGATCAAGGACAGAATGTTTGGGAAAATAAATTTCTTGTTAGTGCAACAATTTCCCCGAGATATTCATCAGGAACTCATGATTTCTCCAATATCCGATCGCTATATTGTGGTCTTGACGATGATAATGAGGTCCAAAAGGAACTGAGATGGCTTAAAGCAAGATACCAAATGGAGTCAAGGGAACGTAAGGATCGACAACTCGGGCTAACAGATGATAAAACTTCTCGTAGCGGTAACGGAGAGCACATAACAGATTATGCCGTTCTGTCACTTTTATTGGCAGAAACATTAAACGGAGGTAACAATGGGATTGGCTTGAAACATGTTCATAAAAGCAGCCCCAATTCGGACACCGTAAGGAACCAAATTTGTGAGGCGATGGAATCCTCTGGTGGAGAAGGTATGGTTACTGCAAAGAGTTTTTATACTGGCTCGTTGCTTCCGCACTCTCTGCACAGGACAGTTTCTCTCCCTGTTGATGCTGTTGATATATAA 2178 0.4096 MNGVTHLEEGDSEFVEVDPTGRYGRYNEILGKGASKTVYKAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHQNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRQKHKRVNIRAVKHWCIQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVMSGKKPDALYKVKDPEVRQFVDKCLATVSLRLSARELLDDPFLQIDDYEYDLKPVDSGEFDDFGPLFRQPLYDLHRGFSNFSNEYSNGCGYEGDSYVHPADNEVCGIELFEHHDDDEPSEHVDISIKGKKKEDGGIFLRLRISDKEGHIRNIYFPFDIEQDTAISVATEMVGELDITDQDVTSIADMIDGEIASLVPEWESGPGIVETPRFANQGFCRNCVSNHTSSGSLMEFLSHNQGNLQLPECCKHGCASMHGRFEEITFPSEEYDNHVRENLNISNRSDGLQYQELWNQHESRELSPIESDQSHSDEQNEQIDKSILAEDQGQNVWENKFLVSATISPRYSSGTHDFSNIRSLYCGLDDDNEVQKELRWLKARYQMESRERKDRQLGLTDDKTSRSGNGEHITDYAVLSLLLAETLNGGNNGIGLKHVHKSSPNSDTVRNQICEAMESSGGEGMVTAKSFYTGSLLPHSLHRTVSLPVDAVDI* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1526 725 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Tpr1g1526 725 CDD STKc_WNK 22 281 - -
Tpr1g1526 725 Gene3D - 372 438 - -
Tpr1g1526 725 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Tpr1g1526 725 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1526 725 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Tpr1g1526 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Tpr1g1526 725 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 714 - -
Tpr1g1526 725 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1526 725 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1526 725 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 714 - -
Tpr1g1526 725 MobiDBLite consensus disorder prediction 534 553 - -
Tpr1g1526 725 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 375 429 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1526 Tpr-Chr1 14030740 14034517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1526 1 508 MAP Kinase Kinase Kinase AT3G22420 58.514 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Tpr1g1526 Pkinase 3.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1526 K08867 - gmx:100775959 1206.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1526 1 14030740 14034517 Tpr1g1526 1 14030740 14034517 ECH
Tpr6g0193 6 1592726 1596254 Tpr1g1526 1 14030740 14034517 PCT