Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1523 ATGACGCATCATGTGAATGTGGAGATGCCGTGTGGATTAGGGCTTTACGTAATTTGGACCAAGTACGGCCCATGTGATTTCCCTAGTCTCGTGAATTTAACTCAGTTGGTAGGACATTGCATTATATATGTTGGAGCTGAGGTTCGAACCTCAGACATCCCACTTATCCACCTTAAAGGTGAATTTCTAGCCAATAGACTAATTGACAAAGAAAACAAGATTTCTCTAGGGCATATTCTATCATGTGACCAATTGGAGAATGTGGATAATGAGGAAAAGAACAATTTTCTAAGTCCATGCGACGTTGATGATGCACTTGAGGCTTCTGATGCAATCCCCGCTGTGACGGTGGCCTTGCCTGCCCCCACAGATGACACAAACATTGCCACCACCTCTACTGCTACCACTATAGCAACACGCTCGACAAGACAACGCAATAACAAGTATTCAGGCGGCGTTAGACAATATCAGAGGCTATGGACAAAGCAGGACGAGATGGAACTGTTGAAGGGATATCTGGATTACATCAAGCAGCAAGGAAGAACAGCTACTACTCTTCAAAGCGACGTAGCTTCGTTCTACGATCAAGTTATGCCTAAATTCAATACATATTTCAATAAGAATCAGCTTGTTGATAAACTACGTAGGTTAAAGAGAAAACACAAGATGGTTTTGGACAAAAGCAAAGAGGTTCAGGTTTCTTTCAAAATCCCACACGAACAGGCCATTTTCGAAATTTCTCACAAGATTTGGGGCAATGACACAGACCATGATGTTTTTGATGTTGATGAATCAAGACATGTTTCTGAAAGTCCTGATCTTATTGACAATGTTAAGATGAAGAATGAATATGTTGACGATTGTGAAGAAATGGATAAAAGGCCGCACAAACGTATGAGGTTAACAACAGATGATGTGAACACAAAAAATGACCAGAACTATGGCGACGTTACTAGTATACACGGCTTCATTGAGGAAACCATGAGGTCCTGTTTCCCACCATTGTTGAAGGAATTGTTGGATGACGCTTCTGTAGAGCCTCTTGGCGCGTTGCCAATGATGTTATCCACTGGGGAGGCGAGGGATGAGCAATGGTTAAAACGGAGGATTTTGGAGCTTGAGGTGTATTTGAATCGATTGGAGTTGTTGCAGGGTCAGATCAAGGCTAGATTAGAGGAGTTAAAATCTAGCTTAGATTGA 1200 0.4208 MTHHVNVEMPCGLGLYVIWTKYGPCDFPSLVNLTQLVGHCIIYVGAEVRTSDIPLIHLKGEFLANRLIDKENKISLGHILSCDQLENVDNEEKNNFLSPCDVDDALEASDAIPAVTVALPAPTDDTNIATTSTATTIATRSTRQRNNKYSGGVRQYQRLWTKQDEMELLKGYLDYIKQQGRTATTLQSDVASFYDQVMPKFNTYFNKNQLVDKLRRLKRKHKMVLDKSKEVQVSFKIPHEQAIFEISHKIWGNDTDHDVFDVDESRHVSESPDLIDNVKMKNEYVDDCEEMDKRPHKRMRLTTDDVNTKNDQNYGDVTSIHGFIEETMRSCFPPLLKELLDDASVEPLGALPMMLSTGEARDEQWLKRRILELEVYLNRLELLQGQIKARLEELKSSLD* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1523 399 Pfam Protein of unknown function, DUF573 157 252 IPR007592 GO:0006355
Tpr1g1523 399 Coils Coil 377 397 - -
Tpr1g1523 399 Coils Coil 207 227 - -
Tpr1g1523 399 PANTHER BNAANNG10740D PROTEIN-RELATED 82 397 IPR007592 GO:0006355
Tpr1g1523 399 PANTHER TRANSCRIPTION FACTOR GEBP FAMILY-RELATED 82 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1523 Tpr-Chr1 14012403 14015138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1523 98 396 GeBP Transcription Factor Family AT5G28040 33.333 3.59e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr1g1523 DUF573 2.2e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1523 - - gmx:102662842 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0196 6 1620032 1621971 Tpr1g1523 1 14012403 14015138 PCT