Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1522 ATGGCAGCATTCTTTCAAAACGGTGTCGTTTCACCCAAACAAGAATTCGTCCAATTCCAACCCGAATACGAAGAAGAAGAAGTTGAACAAGAACAATTCGACGAAGTTTTAGTCGAACCAGACGAAAACAACGAAACCGAACAATCACCTTCCTCCGCCGTCCCCACCGTCATACTAGCCTTACCAAACGCCACAGCAGCAACCGTCGTAACCGACTCGCCTGAGCCAAAACGAGACCAAATGGAAGAGAAGAACGATTCACGTAAACTGTTTCAGCGTCTTTGGACGGACGAAGATGAGATCGTAATTTTGCAAGGGTTTCTTGATTACAACGCGAATCGTGGATCGTCTTATCATAATGATACTGGTTCGTTTTATGATCAGATTAAGTCCAAGATTCAACTCGATTTCAACAAGAGCCAGCTTGTTGATAAACTCCGAAGGTTGAAGAAAAAGTATCGGAACGTTGTTCAGAAATTTGATTCTGGTAAGGAATTTGTCTTCAAAACTCCTCATGATCAAGCTACGTTTGAAATTTCACACAAAATTTGGAAAAACGTCGCTCCAATTGCTGTTGGCGTTCCTGTAGAAGACGATGAAGAAATTAGCCCTAACCCTAATTCAGCTCATATGACAACACCGGTCAAGAATGAGCTGATTATTGAGAAGAAAACCGCATCACGAAAGCGGTCACGAACAACAACTGATGAGAAGCGTGAATTGAATGATTCTTTAGGTTTGAATAATAAGGATAATCATAATAATTCTGCTAATAACAATAGTAGCAATGTTGATGATGAAAATGCTGATAAAAGTAATGTTAGTCATCATACACATAACATACCTGGATTGATTGAAGAGACTGTTAAGAGTTGCTTGACTCCGGTGTTGAAGGAGTTATCGAGTCGTAACACAATGGGGAGTCCTTTTGGTTTTGGGGGAAGAGGGTTTTCATTGGATCCTATGCCATTTAGTTTTATGAATTTTGGGAATGGCGAAAAAGTGCTGGATGACAAGTGGAAGAAGCAACAGATATTGGAGCTGGAAGTGTACTCGAAGCGATTGGAGCTGGTACAGGACGAGATCAAGGTTGCTTTGGAGGAGTTGCGATCGTCTTCCGGAGCTGGAGCTAGGGGAGGAAACAACCATCAATAG 1155 0.4182 MAAFFQNGVVSPKQEFVQFQPEYEEEEVEQEQFDEVLVEPDENNETEQSPSSAVPTVILALPNATAATVVTDSPEPKRDQMEEKNDSRKLFQRLWTDEDEIVILQGFLDYNANRGSSYHNDTGSFYDQIKSKIQLDFNKSQLVDKLRRLKKKYRNVVQKFDSGKEFVFKTPHDQATFEISHKIWKNVAPIAVGVPVEDDEEISPNPNSAHMTTPVKNELIIEKKTASRKRSRTTTDEKRELNDSLGLNNKDNHNNSANNNSSNVDDENADKSNVSHHTHNIPGLIEETVKSCLTPVLKELSSRNTMGSPFGFGGRGFSLDPMPFSFMNFGNGEKVLDDKWKKQQILELEVYSKRLELVQDEIKVALEELRSSSGAGARGGNNHQ* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1522 384 MobiDBLite consensus disorder prediction 247 268 - -
Tpr1g1522 384 MobiDBLite consensus disorder prediction 22 54 - -
Tpr1g1522 384 PANTHER BNAANNG10740D PROTEIN 24 373 - -
Tpr1g1522 384 PANTHER BNAANNG10740D PROTEIN-RELATED 24 373 IPR007592 GO:0006355
Tpr1g1522 384 MobiDBLite consensus disorder prediction 198 282 - -
Tpr1g1522 384 Pfam Protein of unknown function, DUF573 91 185 IPR007592 GO:0006355
Tpr1g1522 384 Coils Coil 348 368 - -
Tpr1g1522 384 MobiDBLite consensus disorder prediction 22 42 - -
Tpr1g1522 384 Coils Coil 139 159 - -
Tpr1g1522 384 MobiDBLite consensus disorder prediction 221 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1522 Tpr-Chr1 14010832 14012414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1522 52 376 GeBP Transcription Factor Family AT5G28040 45.000 1.06e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr1g1522 DUF573 3.8e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1522 - - cam:101492301 428.328