Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1517 ATGGCCTTCTCTCAACAAGTTGAGTCCTCATCTCCTTCTATTGTTTTTCCTGTCCAAAGGCGTCAACCGGAGCTCATTGCTCCGGCTACGCCTACACCCCACGAAACTAAGCTACTATCCGACATAGATGAACAAGCCAGTTTCCACGCCAATATACCAATCATACAATTCTATCGTAACGAGCCATCAATGGCGGGAAAAGACCCGGTTGAAGTCATAAGAAATGCAATTGCACAAGCACTTGTGTTTTACTATCCACTTGCTGGTAGAATTAAGGAAGCTGAGGATTCTAGTGGTAAACTTGTGGTGGATTGTAATGAAGATGGTGTGATGTTCATTGAGGCTGATGCTGATGTTACACTTGAACAATTTGGTGAAATTAAACCACCTTTTCCATGCTTCCAAGAACTTCTTTATGATGCTGCAGTTCCTGAGGGAGTTCTTAATACTCCCATCCTACTTATACAGGTAACACGTTTGAAATGTGGTGATTTCATCTTTGCTCTCCGATTTAACCACACTATGGTAGACGGAGTTGGCACAGTTCATTTCATGTTAGCAGTGACAGCAATAGCTCAGGGAGCTAAACAACCTCCAATTCAACCCTCATGGCATAGAGAGCGTCTAAGGGCAAGGGATCAACCATGTGTCACATTCAACCACCGCGAATACGAACAACTGACTGACATCCAAACTGACGCCGTTTTAACTGCAACAGAATTTTCAGAACAAACTTTTTTCTTCGGCCCCACTGAAATATCCGCAATTCGAAGCTTACTTCCACGTGATCTCGATAGCAAGTCAACCACCTTCGAAGTCCTCACATCGTACATTTGGCGTTGCCGCACAAAAGTGTTGCAGCCAAATCCAAATGAAGAGGTTCGAATGATGTGCATTGTGGACGCACGTGATAAATTCGATCCTCCAATTCCATTTGGTTACTACGGAAACTGTTTTGCTTTCCCTGCGGCTATTACAACCGCAGGGGAGCTTTGTGAAAAGCCATTAGAGTTTGCTGTGGACTTGATAAAGAAAGTGCGCGATGAAGTGAGTGAGGAGTATATGCATTCTGTGGCGGATCTAATGGTGACTAAAGGAAAGCCATTGTTTACTATAGTGAGGTCATGTATTGTGTTGGATACCACATATGCTGGACTTAGAGATTTGAATTTTGGATGGGGGAAGGCAGTGTATGGTGGAATTGCTAAACCTGGGGCTGGGACTTTTCCTTCAGTACATTTTCATGTTCCGGGTCAAAATGCAAAAGGGGAGGAAGGTATATTGGTTTTGATATCATTGCCTACTAAACTTATGTTAGCTTTTGCCAAAGAGTTGGATGACTTGATTGCTTGA 1353 0.4339 MAFSQQVESSSPSIVFPVQRRQPELIAPATPTPHETKLLSDIDEQASFHANIPIIQFYRNEPSMAGKDPVEVIRNAIAQALVFYYPLAGRIKEAEDSSGKLVVDCNEDGVMFIEADADVTLEQFGEIKPPFPCFQELLYDAAVPEGVLNTPILLIQVTRLKCGDFIFALRFNHTMVDGVGTVHFMLAVTAIAQGAKQPPIQPSWHRERLRARDQPCVTFNHREYEQLTDIQTDAVLTATEFSEQTFFFGPTEISAIRSLLPRDLDSKSTTFEVLTSYIWRCRTKVLQPNPNEEVRMMCIVDARDKFDPPIPFGYYGNCFAFPAAITTAGELCEKPLEFAVDLIKKVRDEVSEEYMHSVADLMVTKGKPLFTIVRSCIVLDTTYAGLRDLNFGWGKAVYGGIAKPGAGTFPSVHFHVPGQNAKGEEGILVLISLPTKLMLAFAKELDDLIA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1517 450 Gene3D - 17 224 IPR023213 -
Tpr1g1517 450 Pfam Transferase family 17 446 - -
Tpr1g1517 450 Gene3D - 225 445 IPR023213 -
Tpr1g1517 450 PANTHER BENZYL ALCOHOL O-BENZOYLTRANSFERASE 13 448 - -
Tpr1g1517 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1517 Tpr-Chr1 13964563 13980975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1517 18 445 Monolignol Biosynthesis Gene Families AT5G48930 27.664 1.14e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1517 K19861 - gmx:100820325 643.269