Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1511 ATGAGTGAAAGAGGGAAAAAAGATAGGATGAAGAACATCTTCAAGAAGCTTCATATTGGTAGCAGTCATGATCCTCATCGATCCAATGAAACTCCGCCACCTGTACCATCGCCGTCGTGTGCTGCCGAAGATGTTCAAAGTTCCGGTACTTCTACAGTAACTCCAACTTCCTCGTCGCCGTCTACAGCGCCGGTTCCTGCTGCTTCTTTTGGTGGTGGCGGTGTGTCTGCGGCGGTTAATCGGCAAGATTTTTTCTCGTCGGAGGAGGAATTTCAGGTGCAGCTTGCCCTAGCTATTAGTGCTTCAAATTCGGAGTTTCGTAGTGATGATCCGGAGAAGGATCAGATCCATGCGGCGACGCTGCTTAGTTTGGGAGGACATCGGATTGATTCGACGGGGAATAAGGATGATGTGGCGGAGGCGCTTTCGAGGCAGTATTGGGAATACAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGACTCTACAATGACCCGGCAATGCAAGGAAAGATGCCATCTCTAGCAGATCTTGAAACAAACCCTGGCAGTTCTAGCTTTGAAGTGGTCATAGTTAATCGAACAATTGATCCTGCCCTCGAAGAGCTGGTGCAAATAGCACAATGTATATCATTGGACTGCCCTGTCACCGAGATTGGTATTTTGGTACAAAGGCTTGCCGAACTTGTTACAAGCCATATGGGCGGCCCTGTAAAGGATGCTAATATTATATTAGCAAGATGGACAGAAAGAAGTACAGAGTTAAGGACATCTCTTCACACAAGCGTATTACCGCTTGGGTCCTTAGATATTGGGCTCTCTAGGCATCGTGCTTTACTTTTCAAGATATTAGCAGACAACATTAAGATGCCTTGTAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTCATCCCAGCTGATATTTTAAATGCAAAGGATAATGCCTTTAAGTCTTACAACCCCAAGATTGTGCCGAGTTTTCCTTCCGCTGAGGAAACTGAGCTTTCTTACTCAAAACCTATACTAGCATCTAATGGTGAAGGTAGTAGTCAGACTTCTGTGATAAAAGGTAATGCGCCGCCTTGGAATGGAAAACCGTATACCGAGAAGTCTGAGTATATGCCTTCAAACTTTGGTTTGAACAGAGACACTGGCGTTGGTCCTTCTAAAATTCCTAATAGAGGGAGTCCTAACCAACGGGAAAATTTGCCACCGTCATATGGTAATTCTTTGTACAAAGGTACTCTTGGAATGAATGCAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTGCCATATCCCCAAAACAACCCCAACGACCCTCAGAACCTTTTTGCAGAACTGAACCCATTCTTGATAAAAGGCACTGGGAAGCCTTCTGTGCATAACAAACCTGTGGAAAATAAACCTCCTGTGCACGGTACAAAAAACAAAAACGTTTCTGGTAGACCCGTGTCACCACTGATGTGGAAGAATCAGCATGCTTACAACGAAGTCCCCAGGAAAAATAATCATAATCCTAATGAATATAACCCTCCTTTATTTGCTCCCAATATTCCTTTCAGATCTGAAAATACTGATCTCAGCACTTCCAATCCATCATACAATTCAAATATAAACAATGATACTAGTTCTCAAACTTCGGCACAAATTACTGGTTCAGCCTCACCAGCTGGTGTAGGTGAACTGAACCGGATTGAGGGTCTCAATGCTAATTTTAAAAGGGGTGATTTGGGAAGTTCTCAAAATGTCATGGTTAGCGAACCTGAAAACACTGAACTTAACCATCATGACAGGAGGAAGTGCATATATGACAGATTCATGGGAAGCAGTTTGGAATTAAAAGATTCAGATAGTCCTAGCTCTTCAATTGATTACATTACAAATAGGGTCGATCAAATATTGGACGATGCAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTTATTGGCGAAAGAATTGGTCTGGGTTCATATGGTGAGGTATACCGTGCAGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGTGCCGCCTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGTCATCCAAACGTTGTTCTTTTTATGGGTGCTGTCACCCGGCCTCCTAATCTCTCAATCATTTCGGAGTTTCTCCCAAGAGGAAGCTTGTACCGAATTCTTCATCGCCCTAATTGTCAGATCGACGAGAAACAAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGTATGAATTGCTTGCATGCCAGCACACCTACAATTGTTCACCGAGATCTGAAGTCCCCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGCGATTTTGGGTTGTCAAGGTTGAAGCATAACACGTTTTTATCATCCAAATCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCTTCAAATGAGAAGTGTGATGTTTATAGTTTTGGTGTCATCCTATGGGAGCTTGCCACTTTAAGGTTGCCATGGACTGGGATGAATCCTATGCAAGTTGTTGGTGCCGTAGGTTTCCAAAACCGTCGCCTTGAAATTCCTAAGGAAGTTGATCCATTAGTTGCAAGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCGTTTGCACAGCTCGCAGCGGCTCTAAAGCCCTTGCAACGTCTGGTTATCCCATCTTATCAAGACACTGTAGCTTCACCTCTGCCTCAGGAGATTTCTGTAAATTCTACCCCATGA 2898 0.4375 MSERGKKDRMKNIFKKLHIGSSHDPHRSNETPPPVPSPSCAAEDVQSSGTSTVTPTSSSPSTAPVPAASFGGGGVSAAVNRQDFFSSEEEFQVQLALAISASNSEFRSDDPEKDQIHAATLLSLGGHRIDSTGNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGLYNDPAMQGKMPSLADLETNPGSSSFEVVIVNRTIDPALEELVQIAQCISLDCPVTEIGILVQRLAELVTSHMGGPVKDANIILARWTERSTELRTSLHTSVLPLGSLDIGLSRHRALLFKILADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILNAKDNAFKSYNPKIVPSFPSAEETELSYSKPILASNGEGSSQTSVIKGNAPPWNGKPYTEKSEYMPSNFGLNRDTGVGPSKIPNRGSPNQRENLPPSYGNSLYKGTLGMNAVGDGTRLNVNVVPYPQNNPNDPQNLFAELNPFLIKGTGKPSVHNKPVENKPPVHGTKNKNVSGRPVSPLMWKNQHAYNEVPRKNNHNPNEYNPPLFAPNIPFRSENTDLSTSNPSYNSNINNDTSSQTSAQITGSASPAGVGELNRIEGLNANFKRGDLGSSQNVMVSEPENTELNHHDRRKCIYDRFMGSSLELKDSDSPSSSIDYITNRVDQILDDADVGECEIPWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQIDEKQRIKMALDVARGMNCLHASTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWTGMNPMQVVGAVGFQNRRLEIPKEVDPLVARIIWECWQQDPNLRPSFAQLAAALKPLQRLVIPSYQDTVASPLPQEISVNSTP* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1511 965 ProSitePatterns Protein kinases ATP-binding region signature. 690 712 IPR017441 GO:0005524
Tpr1g1511 965 CDD STKc_MAP3K-like 690 936 - -
Tpr1g1511 965 Gene3D Phosphorylase Kinase; domain 1 677 761 - -
Tpr1g1511 965 SMART serkin_6 684 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1511 965 ProSiteProfiles Protein kinase domain profile. 684 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1511 965 MobiDBLite consensus disorder prediction 418 438 - -
Tpr1g1511 965 PRINTS Tyrosine kinase catalytic domain signature 758 771 IPR001245 GO:0004672|GO:0006468
Tpr1g1511 965 PRINTS Tyrosine kinase catalytic domain signature 797 815 IPR001245 GO:0004672|GO:0006468
Tpr1g1511 965 PRINTS Tyrosine kinase catalytic domain signature 844 854 IPR001245 GO:0004672|GO:0006468
Tpr1g1511 965 PRINTS Tyrosine kinase catalytic domain signature 863 885 IPR001245 GO:0004672|GO:0006468
Tpr1g1511 965 PRINTS Tyrosine kinase catalytic domain signature 907 929 IPR001245 GO:0004672|GO:0006468
Tpr1g1511 965 MobiDBLite consensus disorder prediction 1 25 - -
Tpr1g1511 965 MobiDBLite consensus disorder prediction 41 64 - -
Tpr1g1511 965 SUPERFAMILY Protein kinase-like (PK-like) 675 956 IPR011009 -
Tpr1g1511 965 PANTHER SERINE-THREONINE PROTEIN KINASE 75 957 - -
Tpr1g1511 965 Pfam Protein tyrosine and serine/threonine kinase 685 935 IPR001245 GO:0004672|GO:0006468
Tpr1g1511 965 Gene3D Transferase(Phosphotransferase) domain 1 763 945 - -
Tpr1g1511 965 MobiDBLite consensus disorder prediction 380 401 - -
Tpr1g1511 965 MobiDBLite consensus disorder prediction 424 438 - -
Tpr1g1511 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Tpr1g1511 965 MobiDBLite consensus disorder prediction 1 64 - -
Tpr1g1511 965 Pfam Ethylene-responsive protein kinase Le-CTR1 139 337 - -
Tpr1g1511 965 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 75 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1511 Tpr-Chr1 13897603 13906376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1511 10 920 MAP Kinase Kinase Kinase AT1G08720 56.649 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr1g1511 PK_Tyr_Ser-Thr 2.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1511 - - aprc:113870732 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1511 1 13897603 13906376 Tpr1g1511 1 13897603 13906376 ECH
Tpr1g1511 1 13897603 13906376 Tpr6g3407 6 36761521 36763791 PCT