Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1509 ATGTTGGTTTTTAATGAAGAAGAGAAGATTCTGTTGTCTTCAGAAAATGAAACTGAGGTTTCAAAGTCAGATTCAATTGATGGGTCATTACCGGTTTCAACGGTTTATACCGATGTGGGTGTTGTTCCTGAACACCAAAAGAATGAGCTTGAACACTTCATATCCAATTTACAAAGAGAAGTTGAGGAACTGAGGTTGAAGCAAAGAATAGTGGATGAAAAGAGAAGAGAAGCATTGAGTAAGATATTGGATATCAAAGGGAGCATTAGAGTGTTTTGTAGAATTCGACCGAATCATTTGACAGAGAAGAGAAGAAATTCTGAACCGATATCAGCTGGATCGGATAGGATTCGTGTTAAGTTGGGAGGAACAAGGAAGGATTTTGAGTTTGATAAGGTTTTTCCTCAAGAAACAAGCCAAGAAAGTGTTTTTGTTGAGGTGGAGCCAATTCTAAGATCTGCAATGGATGGACATAATGTGTGTGTTTTCGCTTACGGTCAAACTGGCACAGGCAAAACATTCACTATGGATGGTACAAATGAGCAGCCAGGGATTATTCCTCGTGCTCTCGAAGAGCTCTTTCGTCAAGCCTCGATGGATGGTTCGTCTTCTTTTACTTTTTCAATGAGTATGTTGGAAGTTTACATGGGCAGTGTTAGGGATCTACTGGCTCCAAGACAGTCCTCTAGACCACATGAAAATATGACAAAATGTAATCTCAACATCCAAACAGATCCAAAGGGATTGGTGGAAATTGAGGGTCTCTCAGAAGTGCAGATTTCTGATTGTGCTAAAGCCAAATGGTGGTACAACAAGGGAAGAAGATTCAGATCAACCTCGTGGACTAATGTGAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATAAGCATATTTAGACGCGGGGATACTTCGGAAGCCAAAAGTGAAACAAGTAAGTTGTGGATGGTTGATCTTGGAGGCAGTGAACGGTTGCTGAAAACCGGGGCCAAAGGAATAACACTTGACGAAGGGCGAGCTATTAATCTCTCTCTTTCAGCTCTAGCTGATGTCCTTGCAGCTTTGAAGAGAAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTGACTCAACTACTAAGAGATTCTCTAGGTGATGGCTCAAAGGTCTTGATGCTCGTGCATATTAGTCCTTCTGAAGAAGATGTTTGCGAGACAATTTGTTCGTTAAACTTTGCAAAGAGAGCAAGAGCAATAGAGTCAAATAGAGAAGTACCAATGGAATTGAAGAAGCAACGGGAGAAAAAAATTATGGAGCTCGAGGAAGACATTAAGGAAGCTGAAAAGCAATGTCAGAGTTTAAGGGATCAAATACAGAATGTCGAGTTAAAGTTATGCGAGAATAGAAAGCTCTTTTCAACCATATATAGTCTACAGGAAAGTGATTATGAGTTGGTAACCTCTACTAGCCAAAAAGATGATTTAAAAGAGATTACTGAAACACCTAAAGCATCTAAGAAGTCTACGCAAAGAATTGTCTCGAACTCGGTGCCTCGATTCATGAGTTCAACTGTTGCTAGTCGGCACAGACAGATTGCGTCTGAACAAGAAATTGGCGGGAGATTAAAAAGTTTAAGATCAGTAGCCACTAGAAGTTCAATCCAGTTTTCATGTTCACAATCATTAAGTTGTTCCGATCTTCGAATCAAAACAATACTGCGAAGTTCAACTGGAAAATCTCGGTATGCTGAAACAAATAATGTTCCAAATACAGAAAGGCCTAAATGCAATGAATTGGAATCAAAAGTCATAACTCCTCGAAGTACAACGGTTACATCGTCAGATTCAAATTTGAGAGTAACATTGTATCATCATAGAAGAAGGATGTCTAATCTGATCTAA 1884 0.3986 MLVFNEEEKILLSSENETEVSKSDSIDGSLPVSTVYTDVGVVPEHQKNELEHFISNLQREVEELRLKQRIVDEKRREALSKILDIKGSIRVFCRIRPNHLTEKRRNSEPISAGSDRIRVKLGGTRKDFEFDKVFPQETSQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQPGIIPRALEELFRQASMDGSSSFTFSMSMLEVYMGSVRDLLAPRQSSRPHENMTKCNLNIQTDPKGLVEIEGLSEVQISDCAKAKWWYNKGRRFRSTSWTNVNEASSRSHCLTRISIFRRGDTSEAKSETSKLWMVDLGGSERLLKTGAKGITLDEGRAINLSLSALADVLAALKRKRCHVPYRNSKLTQLLRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNREVPMELKKQREKKIMELEEDIKEAEKQCQSLRDQIQNVELKLCENRKLFSTIYSLQESDYELVTSTSQKDDLKEITETPKASKKSTQRIVSNSVPRFMSSTVASRHRQIASEQEIGGRLKSLRSVATRSSIQFSCSQSLSCSDLRIKTILRSSTGKSRYAETNNVPNTERPKCNELESKVITPRSTTVTSSDSNLRVTLYHHRRRMSNLI* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1509 627 Coils Coil 47 77 - -
Tpr1g1509 627 PANTHER KINESIN-LIKE PROTEIN KLP-3 16 622 - -
Tpr1g1509 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 453 IPR027417 -
Tpr1g1509 627 Gene3D Kinesin motor domain 83 459 IPR036961 -
Tpr1g1509 627 SMART kinesin_4 86 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1509 627 ProSiteProfiles Kinesin motor domain profile. 88 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1509 627 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 16 622 - -
Tpr1g1509 627 PRINTS Kinesin heavy chain signature 157 178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1509 627 PRINTS Kinesin heavy chain signature 282 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1509 627 PRINTS Kinesin heavy chain signature 314 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1509 627 PRINTS Kinesin heavy chain signature 363 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1509 627 Coils Coil 424 458 - -
Tpr1g1509 627 Pfam Kinesin motor domain 96 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1509 Tpr-Chr1 13888241 13892668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1509 75 413 Calmodulin-binding Proteins AT5G65930 40.988 9.66e-72 249
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1509 1 13888241 13892668 Tpr1g1509 1 13888241 13892668 ECH