Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1500 ATGGAGTGCAACAAGGACGAGGCTGTGAGGGCTAAGCAATTGGCAGAAAGTAGAATGCAAAGGGGTCAATTTGTAGAGGCACTGAAGTTTGCTAACAAGGCCAAAAAGATGTATGCTGATGTTGATAACATTGCTCAGATCCTTGCAATTTGTGAGGTTCACGTTGCTGCATTGAACAAACTCTCTTGTTTTGAAATGGACTGGTATCGAATTCTTCAGACAGAAAGACTCTCTGAGGAAGCAATCATAAAGAAACAGTACAGAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAAGTTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAATAGCGTGTTGAGTGACCAAGCAAAGCGGTCTTTACATGACATGAAGGTTAAAGCCCATGTGAGAGCTGCAGCACCTAAGCGTAAGGCCCCATCCCATCACTCAAATGGGAACAAATTTGCAGCGAGAACTGCAGTACCCAAGACCCCATCCCATCACTCAAATGGGAACATGTATGCAGCGTTGAACCCTGAGGTGTGGGAAACTTTAGACAGACTAGTGCAGCAGCTGCAGTCTCAACAAAAGCAATTAGAAATGCTGCAGTCTCGACAAACGCAATTAATAAGGGAAATGATGGACCGGAACCGGAAGAAGCTGGAAGCTAAAAGGAGAAGAAAATGGTAA 687 0.444 MECNKDEAVRAKQLAESRMQRGQFVEALKFANKAKKMYADVDNIAQILAICEVHVAALNKLSCFEMDWYRILQTERLSEEAIIKKQYRKLALLLHPDKNKFAGAEAAFKLIGEANSVLSDQAKRSLHDMKVKAHVRAAAPKRKAPSHHSNGNKFAARTAVPKTPSHHSNGNMYAALNPEVWETLDRLVQQLQSQQKQLEMLQSRQTQLIREMMDRNRKKLEAKRRRKW* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1500 228 Pfam DnaJ domain 67 128 IPR001623 -
Tpr1g1500 228 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 185 - -
Tpr1g1500 228 Coils Coil 184 211 - -
Tpr1g1500 228 SMART dnaj_3 66 123 IPR001623 -
Tpr1g1500 228 CDD DnaJ 67 120 IPR001623 -
Tpr1g1500 228 PRINTS DnaJ domain signature 69 87 IPR001623 -
Tpr1g1500 228 PRINTS DnaJ domain signature 87 102 IPR001623 -
Tpr1g1500 228 PRINTS DnaJ domain signature 103 123 IPR001623 -
Tpr1g1500 228 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Tpr1g1500 228 PANTHER - 1 185 - -
Tpr1g1500 228 SUPERFAMILY Chaperone J-domain 56 133 IPR036869 -
Tpr1g1500 228 Gene3D DnaJ domain 64 223 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1500 Tpr-Chr1 13792195 13792881 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1500 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.168 5.04e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1500 - - gmx:102662460 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0219 6 1784616 1790205 Tpr1g1500 1 13792195 13792881 PCT