Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1498 ATGGAGTGCAACAAAGACGAGGCTGTGAGGGCTAAGCAATTGGCAGAAAGTAGAATGCAAAGGGGTCAATTTGTAGAGGCACTGCGGTTTGCTAATAAGGCCAAAAATTTGTATGCTGATGTTGATAACATTACTCAGATCCTTGCAATTTGTGAGGTTCACACTGCTGCATTGAACAAACTCTCTTGTTCTGAAATGGACTGGTATCAAATTCTTCAGACAGAAAGACTCTCTGAGGAAGCAATCATAAAGAAACAGTACAGAAAGCTTGCACTGATACTTCATCCTGATAAAAATAAATTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAATAGCGTGTTGAGTGACCAAGCAAAGCGGTCTTTACATGACATGAAGGTTAAAGCTCATGTGAGAGCTGCAGCACCTAAGCGTAAGGCCCCATCCCATCACTCAAATGGGAACAAATTTGCAGCGAGAACTGCAGTACCTAAAACCCCATCCCATCACTCAAATGGGAACAAATTTGCAGCGAGAACTGCAGTATCTAAGCGTAAGACCCCATCCCATCACTCAAATGGGAACAAATTTGCAGCGTCAACCCTTAAGGTGCGGGAAAAGTTAGAAAGAATAGTGCAGAAACTGCAGTCTAAAAAAGTGCAATTAAAAATTAAGAAGGGAATTATGGACCAGTTTAAGCCGCAGCAGAGAGCTAAAAGGAGAAGAAAATGGTAA 726 0.4229 MECNKDEAVRAKQLAESRMQRGQFVEALRFANKAKNLYADVDNITQILAICEVHTAALNKLSCSEMDWYQILQTERLSEEAIIKKQYRKLALILHPDKNKFAGAEAAFKLIGEANSVLSDQAKRSLHDMKVKAHVRAAAPKRKAPSHHSNGNKFAARTAVPKTPSHHSNGNKFAARTAVSKRKTPSHHSNGNKFAASTLKVREKLERIVQKLQSKKVQLKIKKGIMDQFKPQQRAKRRRKW* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1498 241 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 230 - -
Tpr1g1498 241 Coils Coil 202 222 - -
Tpr1g1498 241 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Tpr1g1498 241 MobiDBLite consensus disorder prediction 159 198 - -
Tpr1g1498 241 PRINTS DnaJ domain signature 69 87 IPR001623 -
Tpr1g1498 241 PRINTS DnaJ domain signature 87 102 IPR001623 -
Tpr1g1498 241 PRINTS DnaJ domain signature 103 123 IPR001623 -
Tpr1g1498 241 Gene3D DnaJ domain 64 218 IPR036869 -
Tpr1g1498 241 CDD DnaJ 67 120 IPR001623 -
Tpr1g1498 241 Pfam DnaJ domain 67 128 IPR001623 -
Tpr1g1498 241 PANTHER - 1 230 - -
Tpr1g1498 241 SUPERFAMILY Chaperone J-domain 57 133 IPR036869 -
Tpr1g1498 241 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1498 Tpr-Chr1 13780044 13782561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1498 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.168 2.22e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1498 - - gmx:102662460 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1498 1 13780044 13782561 Tpr1g1498 1 13780044 13782561 ECH