Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1497 ATGGAGTGCAACAAGGACGAGGCTGTGAGGGCTAAGCAATTGGCAGAAAGTAGAATGCAAAAGGGTCAATTTGCAGAGGCACTCAAGTTTGCTAACAAGGCCAAAAAGTTGTATGCCGATGTTGATAATATTGCTCAGATCTTTGCAATTTGTGAGGTTCACATTGCTGCATTGAACAAACTCTCTTGTTCTGAAATGGACTGGTATCGAATTCTTCAGACAGAAAGACTCTCTGAAGAAGCGATCATAAAGAAACAGTATAGAAAGCTGGCACTGCTACTTCATCCTGATAAAAATAAATTTGCTGGTGCAGAAGCTGCTTTCAAGTTGATCGGGGAAGCCAATAGGGTGTTGAGTGACCAAGCAAAGCGGTCTTTACATGACATGAAGGTTAAAGCCCATGCGAGAGCTGCAGTACCTAAGCCCTCGTCCTGTCACTCAAATGGGAACGTGTTTGCTGCAAATCAAGTTCCAAATGCAACAAAATCTCAGAATAAAAGTTCTTCAAACTTCCCTTCTCGGAATCCTCATCTGAATGCACAACTGACATTCTGGACAATGTGCCAACATTGTAATACCAGGTTCCAGTACTACTTTAATTATGTGAATATGACCTTACGATGTCGAAATTGTGAGAAATCCTTTGTAGCTTATGCTACCAGTCAACCGGCTGCTCCATCATTTGTACCATTTGTTTCCTCAAAAATGCCTCCAATGCAGGCTCCACCAAAACCAGCCTCTAAAAGTAATGGTGGAAAACCCCCTGGTGGTGGATATGCAGATACTTTTATGCGGTCATATCCTTCATATATGAAAACATGTGCCACTGGAGTTGGTAAGGAACATAAAGATGAAAAGAGTAAGGTTGGCTATGTTCCTGTGTCCAAACCAATGGAGTCACAAGCCTCAAAAAATGTTGGAAGCAAGAGAGTGAGACAACCAGATCCAGGTTCCAAACAGAGATTCAACACTCGAAATGTTGATGAAAATACAGATGTCAATGTTCAAGAAAATCATGCTGATCCTTCAAGATTGAATGTTAGAAGGTCTTCCAGACAAAAGCAACATGTTTCATATGTGGAAACGTATGCAGATGACAATTTTGATGTTCCTTCCAAAAAGCCACGACAAAACGAATCATTTAACATTGATGAAGTTGAGGAAAAGAATGTGTCTGAAGACACAGTTTTGAGTAATACAAGCGGAGATAAGCATTCTGACCTTCAAGAAGATAAGGTATCGGAGTCAGATATTGATTCTAAAATGTTAAATGAGGAAAACTGCTCTCCACCGAATTCAAATATCCCTTCCAGTCCAGAGATCATTACTTGTCCTGATCCAGATTTCAATAATTTTGAGAACGACAAGGCAGATGATTGTTTTGCTGCTAATCAATTATGGGCAATTTATGATAACACTGATGCTATGCCAAGGTTTTATGCTCTTATCAAGAAAGTGACATTCCCTTTCAAGTTGCATATCACTTGGTTGGAAGCTGGCCCAGATGAGGATGATGAGGATGATGAGGTTGCTTGGTATAATGCAGATTTGCCTATTGCTTGTGGTAAATTCAAACTTGCAAATTCTCAGAGAACTACAGATCGAGGTATGTTCTCACATCAGATGCAGTTTATAAAAGGAAACAACAAAGATTCTTACCTAGTGTTTCCCAAGAAGGGAGAAACTTGGGCAATTTTCAGAAATTGGGATATCAAATGGAGTTATAATCCAGAAAATTATTTGAAGCGTGAATTTGCTTATGTGGAAATCCTATCAGATTTTATTGAAAATGTTGGCATTGAAGTAGCTTACCTAGGCAAAGTGAACGGGTTTGTTAGCCTCTTTGAGAAAACTGGGAAGAATGGAGAGAATACATTTTGTATTCTACCGAATGAGCTATACAGATTCTCACATCAAATTCCTTCATATAAGATGAGCGGCAACGAAAGGGAAGGTGTTCCAAGAGGTTGTTTTGAACTTGATCCTGCTGCCCTGCCAACTGAGATATTTGAAGCTGAGAAAGATTCAAGGGAAAAGGTATGA 2043 0.397 MECNKDEAVRAKQLAESRMQKGQFAEALKFANKAKKLYADVDNIAQIFAICEVHIAALNKLSCSEMDWYRILQTERLSEEAIIKKQYRKLALLLHPDKNKFAGAEAAFKLIGEANRVLSDQAKRSLHDMKVKAHARAAVPKPSSCHSNGNVFAANQVPNATKSQNKSSSNFPSRNPHLNAQLTFWTMCQHCNTRFQYYFNYVNMTLRCRNCEKSFVAYATSQPAAPSFVPFVSSKMPPMQAPPKPASKSNGGKPPGGGYADTFMRSYPSYMKTCATGVGKEHKDEKSKVGYVPVSKPMESQASKNVGSKRVRQPDPGSKQRFNTRNVDENTDVNVQENHADPSRLNVRRSSRQKQHVSYVETYADDNFDVPSKKPRQNESFNIDEVEEKNVSEDTVLSNTSGDKHSDLQEDKVSESDIDSKMLNEENCSPPNSNIPSSPEIITCPDPDFNNFENDKADDCFAANQLWAIYDNTDAMPRFYALIKKVTFPFKLHITWLEAGPDEDDEDDEVAWYNADLPIACGKFKLANSQRTTDRGMFSHQMQFIKGNNKDSYLVFPKKGETWAIFRNWDIKWSYNPENYLKREFAYVEILSDFIENVGIEVAYLGKVNGFVSLFEKTGKNGENTFCILPNELYRFSHQIPSYKMSGNEREGVPRGCFELDPAALPTEIFEAEKDSREKV* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1497 680 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 676 - -
Tpr1g1497 680 MobiDBLite consensus disorder prediction 423 437 - -
Tpr1g1497 680 MobiDBLite consensus disorder prediction 404 422 - -
Tpr1g1497 680 CDD DnaJ 67 120 IPR001623 -
Tpr1g1497 680 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Tpr1g1497 680 PANTHER - 1 676 - -
Tpr1g1497 680 SUPERFAMILY Chaperone J-domain 57 131 IPR036869 -
Tpr1g1497 680 SMART dnaj_3 66 123 IPR001623 -
Tpr1g1497 680 Pfam DnaJ domain 67 128 IPR001623 -
Tpr1g1497 680 MobiDBLite consensus disorder prediction 367 392 - -
Tpr1g1497 680 MobiDBLite consensus disorder prediction 276 437 - -
Tpr1g1497 680 PRINTS DnaJ domain signature 69 87 IPR001623 -
Tpr1g1497 680 PRINTS DnaJ domain signature 87 102 IPR001623 -
Tpr1g1497 680 PRINTS DnaJ domain signature 103 123 IPR001623 -
Tpr1g1497 680 Pfam Domain of unknown function (DUF3444) 439 649 IPR024593 -
Tpr1g1497 680 Gene3D DnaJ domain 64 177 IPR036869 -
Tpr1g1497 680 MobiDBLite consensus disorder prediction 317 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1497 Tpr-Chr1 13757810 13761228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1497 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.330 7.52e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1497 - - mtr:MTR_1g060440 949.118