Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1496 ATGGCTGGAAGTAACCAACCACTCAACCCCAACGATTCCAAGATGGTGGTTCCGTTGAACATGTGGGTTTTGATCTCCAATTTTAAGTTAGCATACAATCTTCTCCGTCGTCCTGACGGGACATTCAACCGTGACTTGGCAGAGTTTCTTGATCGAAAAGTTCCGGCAAATGCCAACCCTGTGGATGGAGTTTTCTCATTTGATGTCATTGTTGATAGGGAAACTAATCTCCTTACTCGAATCTACCGTCCTGTTGAGGGAGATGAAAATCATGTGAACATTGTTGATCTTGAGAAGCCTGTTACTGCTGAGGTTCTTCCTGTTCTTGTGTTCTTCCATGGTGGAAGTTTTGCACATTCTTCGGCTAACAGTGCTATATATGATACCTTGTGTCGTCGATTGGTTGGTATTTGTAATGCCGTTGTTGTCTCTGTGAATTATAGGCGTGCACCTGAAAATAGGTATCCTTGTGCTTATGAAGATGGGTGGAAAGCTCTAAAATGGGTTAGTACTAGAACTTGGCTGCAGAGCAAAAAGGATAACAAGGTTCACATCTACATGGTTGGTGATAGTTCGGGCGGGAACATTGTGCACCATGTTGCCTTGAAAGCTTTAGATTCGGAAATTCAGGTTTTGGGGAATATACTGCTCAATCCATTGTTTGGTGGGGAAGAAAGGACAGAATCTGAAAAGCGTCTCGATGGGAGGTATTTTGTTAGAGTTAAAGATAGAGACTGGTATTGGAGAGCTTTTCTTCCCGAAGGGGAAGATAGAGATCATCACGCGTGTAACCCTTTTGGTCCCAAGGGACGAAGCCTTGAAGGGGTTACCTTTCCTAAGAGCCTTGTCGTGGTTGCTGGTTTGGATCTTGTTCAAGATTGGCAATTGGGTTACGCCAAAGGGCTTGAGAAAGCCGGACAAAATGTGAAGTTACTATTTCTAGAGCAAGCCACGATTGGATTTTACTTGCTGCCAAATAATGAGCATTTCTCTCTTGTCATGGATGAGATAAAACAATTTGTCAACTTTGACTGTTCATAG 1041 0.4323 MAGSNQPLNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPVEGDENHVNIVDLEKPVTAEVLPVLVFFHGGSFAHSSANSAIYDTLCRRLVGICNAVVVSVNYRRAPENRYPCAYEDGWKALKWVSTRTWLQSKKDNKVHIYMVGDSSGGNIVHHVALKALDSEIQVLGNILLNPLFGGEERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHHACNPFGPKGRSLEGVTFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQNVKLLFLEQATIGFYLLPNNEHFSLVMDEIKQFVNFDCS* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1496 346 PANTHER ARYLACETAMIDE DEACETYLASE 5 341 - -
Tpr1g1496 346 Pfam alpha/beta hydrolase fold 109 322 IPR013094 GO:0016787
Tpr1g1496 346 PANTHER GIBBERELLIN RECEPTOR GID1C 5 341 - -
Tpr1g1496 346 Gene3D alpha/beta hydrolase 1 343 IPR029058 -
Tpr1g1496 346 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 109 125 IPR002168 GO:0016787
Tpr1g1496 346 SUPERFAMILY alpha/beta-Hydrolases 34 342 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1496 Tpr-Chr1 13748626 13751276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1496 1 345 Carbohydrate Esterase AT3G05120 73.988 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1496 K14493 - gmx:100815161 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1496 1 13748626 13751276 Tpr1g1496 1 13748626 13751276 ECH
Tpr6g3612 6 39275021 39277345 Tpr1g1496 1 13748626 13751276 ECH