Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1492 ATGGCAAATGTGGATGATGCTCACCAGCCAGATAATAGTTTATGGAATGTTATGACAAGTTTTGATAATAACTCAAAGAACGGTACTACGGATGAAGCTTTTAATAATAAACATAGGACTCTAGGATCTCTCTTGGCTAGTTCTTCTTCTGCTCAAGACTTGAGAAATATGGACCTTGAGAAAGAGAGAGATGACGAGGCGTCTCCAAGAGGAGTCTTAGAGGCATGTGTTAGAGGCTTTGATGCTCAGCAATCACCAGAACCGGAAACCAGTTGTTCAAATTCAAGGGCACGGTCGCATTGGGGAAGATTTTTCAAATTGTGGAAGAGAAAATCAGTTAAACGCTTAGCTTCTATCTCTCCTCTTGGTGTGCCAAAGATGCCAAAGTGGAGAAGCAAAAGCACTAGAGAAAATATTGTTATAAGTAGTAATCTACAAAATTTTAGGTCTTCATTGGTGACTTTCAGCCTCTCTGACCTGAGAAATGCAACTAACAATTTCAGCCAAGAAAATCTTATTGGAAGAGGTGGTTTTGCTGAGGTTTACAAGGGTTCTCTTCAAGATGGACAACTAGTAGCTGTGAAGAAAATGACTACAGGGAGCACAGATGAGAAAACATCTGGATTTCTATCTGAGTTAGGCATTATTGCTCATGTTGATCATCCTAATACTGCAAAGCTTGTTGGATGTTGTGTAGAGGGAGAAATGCACCTTGTCTTTGAACTCTCTACACTTGGAAGTTTAGGATCTGTTCTTCATGGTTCAGATAAAACGAAAATGGATTGGAGTAAAAGGTATAAAATTGCTCTTGGAATAGCGGATGGTCTTCTCTATCTTCACGAGAATTGTGAAAGGCGAATAATTCATAGAGATATAAAGGCAGAGAATATTCTGCTCACAGAGAATTTTGATCCACAGATTTGTGATTTTGGGCTTGCAAAGTGGTTACCAGAACAACTGAGTCACCATAATGTGTCCACATTTGAAGGCACATTTGGGTATTTTGCTCCTGAATATTGCATGCATGGCATAGTGGATGAGAAAACTGATGTTTATTCGTTTGGTGTTCTACTTTTGGAGATCATAACCGGGCGCAAGGCTGTGGATGATAATCAGAGGAGTGTTGTGACATGGGCAAAACCTTTGCTTGATGCTAATAATATCAAGGACGTTGTTGATCCATCTCTTGGAGATAACTTCGACAAAGGACAAATGGGATGTCTTGGTTTGACTGCATCAATGTGTGTCGAGCAGTCTCCTATCTTACGCCCTCGCATGAATCAGGTTGTAACATTGCTAAGAGGGCAAGATGCTGTCCTAGCTGCAAAAGCATGCAGCAGGAGGCCTCTCCAAAGAACATATTCAGAAGAGTTACTTGATGCACAAGAATACAACCACACAAAATATTTAAGAGAACTCAATCGACATAAGCAAGTTGCCTTGGATCTTGAATGCATGTAA 1461 0.4031 MANVDDAHQPDNSLWNVMTSFDNNSKNGTTDEAFNNKHRTLGSLLASSSSAQDLRNMDLEKERDDEASPRGVLEACVRGFDAQQSPEPETSCSNSRARSHWGRFFKLWKRKSVKRLASISPLGVPKMPKWRSKSTRENIVISSNLQNFRSSLVTFSLSDLRNATNNFSQENLIGRGGFAEVYKGSLQDGQLVAVKKMTTGSTDEKTSGFLSELGIIAHVDHPNTAKLVGCCVEGEMHLVFELSTLGSLGSVLHGSDKTKMDWSKRYKIALGIADGLLYLHENCERRIIHRDIKAENILLTENFDPQICDFGLAKWLPEQLSHHNVSTFEGTFGYFAPEYCMHGIVDEKTDVYSFGVLLLEIITGRKAVDDNQRSVVTWAKPLLDANNIKDVVDPSLGDNFDKGQMGCLGLTASMCVEQSPILRPRMNQVVTLLRGQDAVLAAKACSRRPLQRTYSEELLDAQEYNHTKYLRELNRHKQVALDLECM* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1492 486 Pfam Protein tyrosine and serine/threonine kinase 170 374 IPR001245 GO:0004672|GO:0006468
Tpr1g1492 486 SUPERFAMILY Protein kinase-like (PK-like) 147 433 IPR011009 -
Tpr1g1492 486 ProSiteProfiles Protein kinase domain profile. 167 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1492 486 ProSitePatterns Protein kinases ATP-binding region signature. 173 196 IPR017441 GO:0005524
Tpr1g1492 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 287 299 IPR008271 GO:0004672|GO:0006468
Tpr1g1492 486 Gene3D Phosphorylase Kinase; domain 1 129 241 - -
Tpr1g1492 486 PANTHER OS08G0249100 PROTEIN 46 478 - -
Tpr1g1492 486 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 46 478 - -
Tpr1g1492 486 SMART serkin_6 167 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1492 486 Gene3D Transferase(Phosphotransferase) domain 1 244 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1492 Tpr-Chr1 13702237 13706028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1492 130 478 Receptor kinase-like Gene Family AT1G53420 39.607 2.88e-77 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tpr1g1492 PK_Tyr_Ser-Thr 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1492 - - cam:101512181 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1492 1 13702237 13706028 Tpr6g0228 6 1857797 1861543 ECH
Tpr1g1249 1 11167581 11170809 Tpr1g1492 1 13702237 13706028 ECH
Tpr7g2743 7 34628483 34632046 Tpr1g1492 1 13702237 13706028 ECH
Tpr1g1492 1 13702237 13706028 Tpr1g1492 1 13702237 13706028 ECH
Tpr6g0228 6 1857797 1861543 Tpr1g1492 1 13702237 13706028 PCT