Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1484 ATGTTACCCTCACCACTTGATTCTTCAACTTCATATCTGAGCACAAGCGCAATAGTTGCACTTTGTGTATTCTTCGCACTCCTTTGCGCTTGCATCATCGTTGGCCACCTTCTTGAAGAGAATCGATGGGCCAATGAATCCATCACTTCTCTCCTTCTTGGTTTGTGTTCTGGAGTGGTGGTATTGTTGGTGACCAAATTCCATAGTACCGAGATTTTAATATTCAACGAAGACTTGTTCTTTCTTTACTTGCTTCCACCAATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAGGAATTTCACTACTATACTTCTGTTTGGAGTCCTCGGAACAGTTATTTCTTTCTGTCTTATATCTCTTGGTGCCTTTCTGCTCTTTAATACGATTGGAATAACTAACCTCGACATAAAAGATCATCTAGCCATTGGGGCCATATTGTCAGCAACTGACTCAGTTTGTACATTACAGGTTCTGAGTCAAGATGAAACGCCTTTTCTTTACAGCATTGTGTTTGGCGAAGGAGTAGTAAATGATGCTACATCTATTGTTCTTTTCAATTCAGTTCAATCACTTGACTTCAGAAGCATCAATGCTATTACAGTTTTGAAATTGTTGGGGACCTTCCTTTACCTCTTTTGCACCAGTACTGCCCTTGGCATAGCAGTTGGACTTTTAAGTGCTTATATTATTAAAACACTTTACTTTGGAAGGCACTCTACCGATCGCGAGGTTGCACTTATGATGTTAATGGCATATTTGTCATATATGATCGCTGAGCTCTTAAATCTCAGTGGAATTTTGACAATTTTCTTCTGTGGCATTGTTATGTCACACTACACATGGCACAACGTTACCGAAAGCTCAAGGACAACAACAAAGCACGCTTTTGCAACTATATCATTCATAGCTGAAACCTTTATATTTCTATATGTTGGCATGGATGCTTTCGACATTGACAAATGGAAACGAAGCAAAGCCAGCATAGGAACTTCAGTTGCTGTCAGCTCAACTTTGATTGCATTAGTTTTGATTGGAAGAGCAGCTTTTGTTTTCCCTATAGCAAACCTTGCAAATTGCACCAAAACAAGAGAGAGCACCAAAATTGAGTTTCGTTCGCAGTTTATAATATGGTGGGCAGGCCTAATGAGAGGCGCAGTAACCATTGCATTGTCTTATAACCAGTTTTCAAAATCTAAGATGGCATCGGCTGAAGACTCTTTGATGATCACTTCAACTATAATCCTTGTCTTATTCAGTACTGTGGTATTTGGTTCTATAACAAAGCCTTTGATTAAGGCTGTGAAGTTAAGGCATTCAAAACCATCAATTTCCGATTCCACTGATATTCAAGAGGATCTGAGATTATTATTTCTAGAAAGCAATTGTTCCATCAACCAAAGCAATAATCAAGCATTTCACAGACAAAGTAGCTTCAGATTGATGATACGTTATCCTACTACTACGGTTCACTACTTCTGGAGGAAATTCGATGATAAGTTTATGAGACCTATATTTGGTGGTAGAGGTTTCGTTCCAGTTGTTCCTGGTTCACCGCCCGCTGAAGAGGATCTTTCTTGA 1593 0.3923 MLPSPLDSSTSYLSTSAIVALCVFFALLCACIIVGHLLEENRWANESITSLLLGLCSGVVVLLVTKFHSTEILIFNEDLFFLYLLPPIIFNAGFQVKKKQFFRNFTTILLFGVLGTVISFCLISLGAFLLFNTIGITNLDIKDHLAIGAILSATDSVCTLQVLSQDETPFLYSIVFGEGVVNDATSIVLFNSVQSLDFRSINAITVLKLLGTFLYLFCTSTALGIAVGLLSAYIIKTLYFGRHSTDREVALMMLMAYLSYMIAELLNLSGILTIFFCGIVMSHYTWHNVTESSRTTTKHAFATISFIAETFIFLYVGMDAFDIDKWKRSKASIGTSVAVSSTLIALVLIGRAAFVFPIANLANCTKTRESTKIEFRSQFIIWWAGLMRGAVTIALSYNQFSKSKMASAEDSLMITSTIILVLFSTVVFGSITKPLIKAVKLRHSKPSISDSTDIQEDLRLLFLESNCSINQSNNQAFHRQSSFRLMIRYPTTTVHYFWRKFDDKFMRPIFGGRGFVPVVPGSPPAEEDLS* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1484 530 Gene3D - 140 192 - -
Tpr1g1484 530 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 19 465 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr1g1484 530 Pfam Sodium/hydrogen exchanger family 23 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr1g1484 530 PANTHER SODIUM/HYDROGEN EXCHANGER 8 528 IPR018422 GO:0006812|GO:0015299|GO:0016021
Tpr1g1484 530 PRINTS Na+/H+ exchanger signature 79 90 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr1g1484 530 PRINTS Na+/H+ exchanger signature 93 107 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr1g1484 530 PRINTS Na+/H+ exchanger signature 108 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr1g1484 530 PRINTS Na+/H+ exchanger signature 148 158 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Tpr1g1484 530 PANTHER SODIUM/HYDROGEN EXCHANGER 8 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1484 Tpr-Chr1 13624476 13628174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1484 9 530 Antiporters AT3G05030 61.914 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1484 K14724 - jre:108988829 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1484 1 13624476 13628174 Tpr1g1484 1 13624476 13628174 ECH