Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1479 ATGGAAATTAATACAACTACCACTGTACCTGCAGGGCCACTACTAACTGCTTCTACAAAGAACCATACTTTCATACACCATTACCATCACTTACATTCAGAAAATCATAACCATAGCCATGTTGACCATTTTCCTTTCAAAACCGTTGTCATAATCATCACAGTGGTTACCTTAATTATGCTCCTATTTACCATTTTTTTGGTTGTATGTTTGATCCGTCGCCAAAAATCTTCCAGCAAAAATGGGATTTGCAAAGATGAATGTGAGAGTAGAGTGCTTCATGACACAAGCAGGAGGCACATGGCTTCAACAATCTTGTCCTTTGATTCTAGCCCAGATGTTAAAGGGGGGTGTCTTTATGGGGGAAATTTGAGCAGGACACCAACAACACCTAAATTTAGAGGAGTGCAAGTTTTCACTTATAGGGAGCTAGAAGTTGCTACAAATGGATTCAATGAAGCAAATGTGATTAGTAATGGAGGAGTTACTAATGGTTTGATGTATAAGGGAGTCTTAAATGATGGAACTTTAGCAGCAATTAAGTTGCTTCACAGTGAGGGTAAGCAAGGAGAGCGTGCCTTCAGAATAGAGGTTGATCTCCTAAGCCAATTGCGTTCTCCATATTTGGTGGAATTACTTGGCTATTGTGCTGACCAACACCACAGGTTATTGATTTTTGAATACATGCCTAATGGTACACTCCAACATCACCTACATTCCCCTAACAATCAAACACAACCATTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCTAGGGCTTTGGAGTTCCTGCATGAACATGCTGTTTCACCCGTGATCCACAGAGACTTCAAGACCTATAATGTTCTACTGGATCAGAATTTCCGTGCAAAGGTGTCAGATTTTGGATTGGCTAAGATGGGATCAGAGAAGAGAAATGGCCAAGTTTCTACCCGTGTTCTTGGGACCACTGGATATTTGGCACCAGAGTACGCCTCCACGGGTAAGCTTACTACAAAGTCAGATGTTTACAGCTACGGTGTAGTTCTTCTGGAATTGCTAACAGGACGTGTACCAGTTGACATTAAGCGGCCCACAGGAGAACATGTCCTCGTGTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAAGTTGTGGAAATGGTTGACCCAGTTCTACACGGACAGTACTCAAAGAAAGCTTTAGTTCAGGTAGCTGCCATCGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGACCGCTCATGACAGATGTTGTACAATCATTGATACCACTCGTTAGGACCCATTCTCTTTCCAGTTCCCTAAGATTTCAGAAACAAATACCAAGTTATTAG 1347 0.4246 MEINTTTTVPAGPLLTASTKNHTFIHHYHHLHSENHNHSHVDHFPFKTVVIIITVVTLIMLLFTIFLVVCLIRRQKSSSKNGICKDECESRVLHDTSRRHMASTILSFDSSPDVKGGCLYGGNLSRTPTTPKFRGVQVFTYRELEVATNGFNEANVISNGGVTNGLMYKGVLNDGTLAAIKLLHSEGKQGERAFRIEVDLLSQLRSPYLVELLGYCADQHHRLLIFEYMPNGTLQHHLHSPNNQTQPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKTYNVLLDQNFRAKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPTGEHVLVSWALPRLTNREKVVEMVDPVLHGQYSKKALVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRTHSLSSSLRFQKQIPSY* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1479 448 Gene3D Transferase(Phosphotransferase) domain 1 229 443 - -
Tpr1g1479 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Tpr1g1479 448 ProSiteProfiles Protein kinase domain profile. 151 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1479 448 PANTHER OS01G0750732 PROTEIN 1 439 - -
Tpr1g1479 448 CDD STKc_IRAK 160 429 - -
Tpr1g1479 448 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 1 439 - -
Tpr1g1479 448 SUPERFAMILY Protein kinase-like (PK-like) 128 426 IPR011009 -
Tpr1g1479 448 Pfam Protein tyrosine and serine/threonine kinase 160 426 IPR001245 GO:0004672|GO:0006468
Tpr1g1479 448 Gene3D Phosphorylase Kinase; domain 1 125 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1479 Tpr-Chr1 13553832 13557467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1479 49 439 Receptor kinase-like Gene Family AT3G58690 56.091 1.73e-150 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tpr1g1479 PK_Tyr_Ser-Thr 5.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1479 - - mtr:MTR_1g082580 807.749