Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1461 ATGGAAATGAACGATCAAAGCATTCAAATTCAAATGCTCGCTGAGAAATTTCACCTTTTCGTTCGTGATTGCGAACTCAAGCAATCACCAAACGCAAATCTCTCAGATAATGATGAATCAAAGAAAGTGAACGAAAACTCTGATTCCATGGATGAAAACAGTATGTCTAATGGAATTCATGAGAATTCATCGGATCTGGATCATACGCTTCCGATTTTGAAGAAAGTCTTTGATCTGAGTACAAAAGTTCAGGATTTGAAGAAACAGCATGTAGCCTTATCTGATCATGTGAAATTAACCGCTGAATCCTTTCCTGGCCTTGATGTTTTGAACTCTATTCAGCTTCTCGGTTCTGAATATGAACTCTTGAAAAGAAAGTATCTGGATGAATCCACTGAGCGTAGGCGGCTTTACAATGAAATAATTGAACTAAAGGGTAATATCAGGGTTTACTGCAGATGCAGACCTTTAAGTGAAAATGAAAGGGCAAATGGATTTACATCTGTTGTCAATTTTGAATCGACTCTTGATAATGAGCTTCAAGTCATTTCCTCAGATTCTTCCAAGAAGCCGTATAAATTTGATCATGTATTTAGGCCAGAAGATAACCAAGAGGCTGTTTTTTCTCAAACTAAACCTGTTGCTACATCAGTATTGGATGGTTTTAATGTCTGTATATTTGCTTATGGGCAAACTGGAACCGGTAAAACATTTACGATGGAGGGAACACCAGAAGAGAGGGGAGTTAACTACCGAACACTTGAAGAATTGTTTAGGATATCTGAAGAGAGAAAGGGTGTAATGAAGTATGACTTACATGTTAGTATGTTGGAGGTTTACAACGAGAAGATAAGAGATCTTCTAGTGGAAAACTCTACCCAGCCTACTAAGAAATTGGAGATAAAGCAAGCTGCAGAAGGAACACAAGAAGTCCCAGGACTTGTTGAAGCTCATGTCCATGGAACAGAAGATGTGTGGGAATTGCTCAAGACTGGAAATAGAGTCAGATCTGTTGGCTCCACCTCTGCCAATGAGCTTAGCAGCCGTTCTCATTGCTTGTTGAGAGTAACAGTCATCGGGGAGAATTTAATCAATGGCCAGAAAACAAGGAGTCACCTCTGGCTAGTAGACTTAGCAGGTAGCGAGCGTGTGGGAAAAACCGAAGCTGAGGGAGAAAGATTAAAGGAATCTCAATTCATAAACAAGTCTCTTTCGGCACTAGGAGATGTTATTTCTGCTCTTGCTTCCAAAGCAGCCCACATCCCTTACAGAAACTCGAAGCTCACTCATATATTGCAAAGCTCTTTAGGAGGAGATTGTAAAACACTAATGTTTGTTCAAGTAAGTCCAAGCTCGGCCGACTTAGGAGAGACACTATGTTCATTGAATTTTGCCACACGTGTTCGAGGAATTGAGAGTGGCCCAGCTCGCAAACAAGTAGACCTCAGTGAGCTGTTTAAGTACAAACAAATGGCAGAAAAGGCCAAACACGACGAGAAGGAAACAAAGAAGTTACAGGATAGTCTGCAAACTTTGCAACTCAGACTTGCTGCGAGAGAATACCATTGTAAAAGTCTTCAAGAAAAGGTACGGGACCTGGAGAATCAAGTAGCAGAAGAAAGAAAAACTAGACTAAAGCAAGAAAGTAGATCACTTGCCGCTGTTTCATCTCAACCTCCAACATATAAACAAACAGCAGCAGCTCATAAAACCATGACAGATAAGAAACCACCACTGAATCCTTCAAAACTGAGAATGCCCCTTAGAAGGATAAACAATTTCTTGCCTCCCCCATCTCCTACCACATCAAAGAGATACACATACACACATCAAATGAACGGAAAGGAAAATTCTGCTCGAAGGAATTCAATGACAACAAACACAGAAAGCTTTGCAAGACCAAGAAACAGGGTATCCATTGCTATGAGACCACCACCTGTACAACCAACAACACAGATCCTTCAGCCAAGGAGAAGAGTCTCCATTGCTACACTTCGTCCTGATCCAACATCTGAAATGACAACTCCACTTCGTACCTCAGCTTCGAGATTTACCGGTGGAAGCAATGCACCAGTGATGAGGAGCCAAAGGGGTCGGTATTCAAATTTGTTTGCCCCACTGCCAACGATAAGAGCAGATACAACACCAATGTCTGTTAGGGGTAGCAGTAAGTTTATGGGCAGTCCAGTACATGCACAGGCAAGTTCACAGGTGGGTAGGCATCCAACTGCAATTGCGCTGCAAAGGAGATCATTAGTTTGGAGTCCTCTTAGGCTGAGAGAAATGAAAAGCAAGCGAAAATCATCACTCTTGCCATCTCAATTGCAATAG 2331 0.4157 MEMNDQSIQIQMLAEKFHLFVRDCELKQSPNANLSDNDESKKVNENSDSMDENSMSNGIHENSSDLDHTLPILKKVFDLSTKVQDLKKQHVALSDHVKLTAESFPGLDVLNSIQLLGSEYELLKRKYLDESTERRRLYNEIIELKGNIRVYCRCRPLSENERANGFTSVVNFESTLDNELQVISSDSSKKPYKFDHVFRPEDNQEAVFSQTKPVATSVLDGFNVCIFAYGQTGTGKTFTMEGTPEERGVNYRTLEELFRISEERKGVMKYDLHVSMLEVYNEKIRDLLVENSTQPTKKLEIKQAAEGTQEVPGLVEAHVHGTEDVWELLKTGNRVRSVGSTSANELSSRSHCLLRVTVIGENLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKAAHIPYRNSKLTHILQSSLGGDCKTLMFVQVSPSSADLGETLCSLNFATRVRGIESGPARKQVDLSELFKYKQMAEKAKHDEKETKKLQDSLQTLQLRLAAREYHCKSLQEKVRDLENQVAEERKTRLKQESRSLAAVSSQPPTYKQTAAAHKTMTDKKPPLNPSKLRMPLRRINNFLPPPSPTTSKRYTYTHQMNGKENSARRNSMTTNTESFARPRNRVSIAMRPPPVQPTTQILQPRRRVSIATLRPDPTSEMTTPLRTSASRFTGGSNAPVMRSQRGRYSNLFAPLPTIRADTTPMSVRGSSKFMGSPVHAQASSQVGRHPTAIALQRRSLVWSPLRLREMKSKRKSSLLPSQLQ* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1461 776 Pfam Kinesin motor domain 153 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1461 776 Gene3D Kinesin motor domain 142 513 IPR036961 -
Tpr1g1461 776 MobiDBLite consensus disorder prediction 49 63 - -
Tpr1g1461 776 CDD KISc_C_terminal 145 472 - -
Tpr1g1461 776 ProSitePatterns Kinesin motor domain signature. 371 382 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr1g1461 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 505 IPR027417 -
Tpr1g1461 776 PANTHER KINESIN-LIKE PROTEIN KIN-14S 87 772 - -
Tpr1g1461 776 Coils Coil 516 550 - -
Tpr1g1461 776 PRINTS Kinesin heavy chain signature 221 242 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1461 776 PRINTS Kinesin heavy chain signature 341 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1461 776 PRINTS Kinesin heavy chain signature 372 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1461 776 PRINTS Kinesin heavy chain signature 421 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1461 776 SMART kinesin_4 145 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1461 776 MobiDBLite consensus disorder prediction 31 63 - -
Tpr1g1461 776 ProSiteProfiles Kinesin motor domain profile. 147 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1461 776 PANTHER KINESIN-RELATED 87 772 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1461 Tpr-Chr1 13339537 13344072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1461 113 492 Calmodulin-binding Proteins AT5G65930 41.775 2.66e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1461 K10406 - gmx:100788477 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1461 1 13339537 13344072 Tpr1g1461 1 13339537 13344072 ECH