Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1457 ATGGCTGATTTTCAGACCTCTACCCACCGATCCAAGTGGATCTTCTCTCCTCAAAAACTGGTTGAGAAATATACAGATGCTAATCAGAGAGCCAAACAAACCCTAGAGCAGTGTGGGGCAACTCTAATGGAAGTAGATGCTGATGGGTCTTTGTCATATCCGGAATCCCAGACGACTGCAAACAATAGTGAAAAACATTCTCGGATAAAACCTCTTAGTATTGAAGAGGAGCAATGTATAAAGGTGTTTTATGAAAACAAGCTACAAGAAGTGTGCAACAATTTCCACTTCCCTCATAAGATCCAGGCAACAGCCCTCATATTTTTTAAAAGGTTCTATCTGCAATGGTCAGTGATGGAACATCAACCAAAAAATATAATGTTGACATGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTATCGGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATTGTTTATGCTCCGTATCGCTCAGTTGAAGGTTTTACAGATTATATGGAGGAATTTTGCAATGCTGGTGAGGACGAGCTTCAAATGCTCAAGGCTTTGCAAAATACAGCAAGACTAGAAGTTGATAAAGTGATGCTTACAGATGCACCACTCTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCACTACGCACCTCAAATGCTCTCCATAAAGTTCTTGACTTTGATAGTTTTCTGAGCAGAATTTTTTCCCATCAGAATTCTACGCACACAATGGCCGAGCTTCTTGAATCATTGGATGCAATTGATTCTTGGGTTAGAAAATATAGAAGTCCTTCGGAGAAAGAATTGAAGCATATCAACCGGAAACTGAAGTCTTGTTGGGGTCAGAGCTCTCATGACGAGGGAAAGAAGAGGGAGAAGAAATCAAAGCACAAGTCCAGAAAGAGCTCAAACGAAGCACAAAATGCTTAG 993 0.4048 MADFQTSTHRSKWIFSPQKLVEKYTDANQRAKQTLEQCGATLMEVDADGSLSYPESQTTANNSEKHSRIKPLSIEEEQCIKVFYENKLQEVCNNFHFPHKIQATALIFFKRFYLQWSVMEHQPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFTDYMEEFCNAGEDELQMLKALQNTARLEVDKVMLTDAPLLFPPGQLALAALRTSNALHKVLDFDSFLSRIFSHQNSTHTMAELLESLDAIDSWVRKYRSPSEKELKHINRKLKSCWGQSSHDEGKKREKKSKHKSRKSSNEAQNA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1457 330 PANTHER CYCLIN 1 328 IPR043198 GO:0006357|GO:0016538
Tpr1g1457 330 Pfam Cyclin, N-terminal domain 88 173 IPR006671 -
Tpr1g1457 330 Gene3D - 176 281 - -
Tpr1g1457 330 PANTHER CYCLIN-H 1 328 - -
Tpr1g1457 330 CDD CYCLIN 88 166 IPR013763 -
Tpr1g1457 330 SMART cyclin_7 86 167 IPR013763 -
Tpr1g1457 330 Gene3D - 62 174 - -
Tpr1g1457 330 Pfam Cyclin C-terminal domain 178 277 IPR031658 -
Tpr1g1457 330 SUPERFAMILY Cyclin-like 178 304 IPR036915 -
Tpr1g1457 330 MobiDBLite consensus disorder prediction 301 330 - -
Tpr1g1457 330 SUPERFAMILY Cyclin-like 65 175 IPR036915 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1457 1 279 Core Cell Cycle Gene Families AT5G27620 64.158 1.88e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1457 K06634 - gmx:547736 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1457 1 13310139 13315943 Tpr1g1457 1 13310139 13315943 ECH