Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1438 ATGAGTTTTGGTTCTGAGTTTCTTACAATGTTCTTCATCATTATCACATTCTTGATTACTTTATCATCACAAAGTACTCACATTTTGAGTGTTGGTGCTTTAATCAATTCAGCTGGAAGTTTCCATGTTCATAGTTTACAAGAAAGCTATTTCTTGAAGGAGAAAAATGAAGAACAAAATGAAAAGTTTCAAGTTGTGAAAATTTCTGGTTTGGATGAGAATGAAGTGAAACATGGTTTTATAGTTGAAAAGTTTAGATCTTTACTTGGTTTAAAGAGTTTCCACAAAAGGGTTCATTCTAAATCCAATTCTGATTCTGATTCTGATTCTGATCAGTTTCTTACACCTTCACCTTCTCCATCACAAAACATTGAAGCTGAAGTAGCTCTAGCTCCAGCTCCGGCTCCGGCTCCAACACCTTCTGGATTAATCCATTTTCATCCTCATTCTCATCATCAAAAACATCACTTTCATTGGAACAATCCATCTAAAAAGTTTCATCATGATGATGATGATAGAGGAAGAACTAAAAAGATACTAGTAGCTGTTTTTGTTTCTATTGGAATTCTTTCATTGGTTAGTGTTTTTGGTTTAATCTTATTCTGCAGGAAAAAGTTCACAAATCACAAAAAGAAGAAACCAAAAAGGACAATGCCTATATGTAGCAAAACAAAAGATAAGGTGAGTTTAAATAATCAAGGATTAGATCTGTTTTATCTTGATGCATTAGGTGAAGATATTGAACAACAATGTAGTACAACATTGAAAAACACTAATGATGATGACAATAATGTTAGTAGTAGTTCTTTTACTAAGGAAATTGTGGAAATGGAATTAGTAAAGAAAAATGAAAATGATTATGTTGTTGATGATGAGAAAAATTCTTCATCTTGTGTTGATGAAATTGTTAATGAAGATTGTGATTCTTCAGAAGATGAAAGTTTTCATTCATTTGTTGATTCACAAGCAAATTCAAGACTTTCTAATGCTTCAATTTGTAGTCTTAGTGATACACATTCCTTGGTGTCACCTCAAAATTCATTTTCATTATTACCAAACCAAACATTTCCTAGTTCTCCACAAAACTCAATTATTGTTACAAACACAAATGATTCTCACCAACCACAACTACCATTTAGTCCAAAACAAAAAGACCAAGAGATTGAAAATGAAAATGAAACCTTTGTTCAACTTCAATCACCTCCTCCTCCACCACCAACACTGCCGCCTCCGCCGCCACCTACACCACCATTGAAAATGCCACTTTTTACTTTACATTCACTAACATCTTCATCTAGAGTTTCATCTCACTCTCCACTTTCATTGACTTCTCATACCTTATCTTCTCCTATGAATTCAGAATCTTCTTCAAGATCAAATCAAAGTCCTGAAAAAGATTCATTTTCTCCTTCTCCATCTCCACCAAACCTCACAAAATCTCCTCTTGGAAGCATTCCTCCACCACCATTTCCACCTCCATTTCCAAAAGGAAATAGCAACAATAATGGTAAAACACCACCTCCTCCACCATATCAATTCCCTCAATCACCACTTGGTAAAGATGGTACACCATTGGCTAAACTCAAACCACTTCATTGGGACAAAGTAAGAGCTGCACCAAATCGTACAATGGTTTGGGACAAACTAAGATCAAGCTCATTTGAGTTGGATGAGGAAATGATTGAGTCACTTTTTGGCTATAATTTACAAAATTCAATTAATAATGATGAAAGTAAGAGTAAAACACCATCTCCAGGGAAGCATGTACTTGATCCAAAAAGGTTGCAGAACATAACAATATTATCAAAAGCTTTGAATGCGACAGCTGAACAAGTATGTGATGCACTAATGCAAGGGAAGGGATTGTCTTTACCACAATTAGAGGCACTAGTGAAAATGGTACCTACCAAAGAAGAAGAGGTTAAACTCTTCAATTATAAAGGCAACATCAATGAATTGGGGTCCGCAGAAAGGTTTGTGAGAGCAGTGCTTAGTGTACCATTTGCTTTTCAAAGAGTTGAAACCATGCTTTACAAAGAGACTTTTGATGATGAAGTTGTTCATCTAAGGAACTCTTTTTCAATGCTTGAGGAGGCATGCAAGGAGCTAAGATCAAGCAGACTCTTCTTGAAACTACTAGAAGCAGTACTCAAAACAGGAAACCGAATGAACGTCGGAACAATACGAGGAGGCGCAAGAGCATTCAAACTCGACGCTCTACTCAAGCTAGCAGACGTTAAAGGAACAGATGGAAAAACAACCTTACTCCATTTCGTTGTTCAAGAAATCGTCCGTTCAGAAGGAATAAGAGTTTCAGATAGCATAATGGGAAAAATAAGCCAAAAAAGTAACAAAAACAGAACAGAAGAAGAAAAAGAAGAAGATTACAGAAAAATGGGACTAGAATTAGTTTCTGGTTTAAGTACTGAATTGTACAATGTTAAAAAGACAGCAACAATTGACTTAGATGTTCTTGCTAGTTCAGTTTCAAATCTATATGATGGAATGATTATGATGAAACAACTAGTGGAAAATGAGTTACATGAAGATGAAATGAGTCATAATTTTGTTATGACTATGAAGATATTTTTGCAATATGTTGATGGAAATTTGAAGGAATTGAGAGGTGAAGAAGATAGAGTGATTGCACGTGTTAAAGAAATAACTGAGTATTTTCATGGTGATGTTAGTAAAGAGGATAATCCATTAAGGATATTTGTGATAGTGAGAGATTTTATGGGAATGTTGGATAATGTTTGTAAAGAGCTTAGAAAGTCTAAAGGTTCACGTACTCCAAATCCTCTTGCTCCTTTTAGATAG 2820 0.3493 MSFGSEFLTMFFIIITFLITLSSQSTHILSVGALINSAGSFHVHSLQESYFLKEKNEEQNEKFQVVKISGLDENEVKHGFIVEKFRSLLGLKSFHKRVHSKSNSDSDSDSDQFLTPSPSPSQNIEAEVALAPAPAPAPTPSGLIHFHPHSHHQKHHFHWNNPSKKFHHDDDDRGRTKKILVAVFVSIGILSLVSVFGLILFCRKKFTNHKKKKPKRTMPICSKTKDKVSLNNQGLDLFYLDALGEDIEQQCSTTLKNTNDDDNNVSSSSFTKEIVEMELVKKNENDYVVDDEKNSSSCVDEIVNEDCDSSEDESFHSFVDSQANSRLSNASICSLSDTHSLVSPQNSFSLLPNQTFPSSPQNSIIVTNTNDSHQPQLPFSPKQKDQEIENENETFVQLQSPPPPPPTLPPPPPPTPPLKMPLFTLHSLTSSSRVSSHSPLSLTSHTLSSPMNSESSSRSNQSPEKDSFSPSPSPPNLTKSPLGSIPPPPFPPPFPKGNSNNNGKTPPPPPYQFPQSPLGKDGTPLAKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSINNDESKSKTPSPGKHVLDPKRLQNITILSKALNATAEQVCDALMQGKGLSLPQLEALVKMVPTKEEEVKLFNYKGNINELGSAERFVRAVLSVPFAFQRVETMLYKETFDDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQKSNKNRTEEEKEEDYRKMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLYDGMIMMKQLVENELHEDEMSHNFVMTMKIFLQYVDGNLKELRGEEDRVIARVKEITEYFHGDVSKEDNPLRIFVIVRDFMGMLDNVCKELRKSKGSRTPNPLAPFR* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1438 939 Pfam Formin Homology 2 Domain 521 916 IPR015425 -
Tpr1g1438 939 SUPERFAMILY Formin homology 2 domain (FH2 domain) 531 926 - -
Tpr1g1438 939 MobiDBLite consensus disorder prediction 429 479 - -
Tpr1g1438 939 PANTHER FORMIN-LIKE PROTEIN 60 340 - -
Tpr1g1438 939 PANTHER FORMIN-LIKE PROTEIN 399 939 - -
Tpr1g1438 939 SMART it6_source 518 931 IPR015425 -
Tpr1g1438 939 MobiDBLite consensus disorder prediction 100 120 - -
Tpr1g1438 939 ProSiteProfiles Formin homology-2 (FH2) domain profile. 518 939 IPR015425 -
Tpr1g1438 939 PANTHER FORMIN-RELATED 399 939 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tpr1g1438 939 PANTHER FORMIN-RELATED 60 340 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tpr1g1438 939 MobiDBLite consensus disorder prediction 371 409 - -
Tpr1g1438 939 MobiDBLite consensus disorder prediction 429 467 - -
Tpr1g1438 939 Gene3D Formin, FH2 domain 540 932 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1438 Tpr-Chr1 13119333 13123991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1438 445 939 FH2 protein (formin) Gene Family AT3G05470 69.261 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1438 - - gmx:100793761 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1438 1 13119333 13123991 Tpr1g1438 1 13119333 13123991 ECH