Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1397 ATGGCGACAAAGCCATTATCAATTCTATCTGTTGTTGAAGATGTCATTCAAAAAAATAGAAGCCAATTCGATGACATCGATTTCACTTCAAATATTAGAAAATCTGAAGAAGCTTCATCAAGAAGGAACGAAGCAGCTATGTGGCTGCAAAATATAGTTGGAGGAAAAGAATTGTTGGATGAACCTTCTGAAGAAGCTTTCAGGATTGCATTGCGTAGTGGCATTATCCTTTGCAACGCTCTCAACAAAGTTCAACCTGGTGCTGTACCCAATGTAGTTGAAGCCCCAAGTGACATTGATAACATTCCTGATGGGGCAGCACTATCTGTTTATCAATACTTTGAAAATGTAAGGAATTTTCTAGTAACTATGGAGGAGATGGGGCTTCCAACATTTGATGCTTCTGATTTGGAACAGGGAGGGAAATCATCAAGGATAGTGAATTGTGTTTTAGCACTTAAATCGTATAGTGAATGGAAACTAGAAGGCAAAAATGGATTGTGGAAATATGGCGGGAGTCCAAAACCACAACCTACCATTGCAAAAATATTTGTGAGGAAAAACTCAATACCATTCATGAAGTCTTTGTCTAGAGGAACTGCTTCGTTGGGCGACAAAGATGGTTCGCCGAGTGAACACTCTTCAAGCATTGAGACTGTACTTAATGATGCTGTACTTAATGATGGCAGTGAAGAGGGTTCTATTCCTTCCTTGTATTCACTAGTTCGTGAAATTTTGCATGATAAGAAGCAAGAAGAAATTCCATTTATAGTAGAATCTCTGCTTAACAAAGTCATGGAAGAGTTTGAAAGTCGTGCGATCACAGTACAACAAGAAACGATGGAAGAAATTGAAGATGTAGAAATCAAACAAAAGCAAAATGATGATGTGAAGTACCATGACGATGAAAAGTCAAGTATGCAAAACATAATTCAAAGGCAACATGAAAACATCCAGGAATTGAAAATGATTGTTAATCAAACAAAAGCAGGAATGCACTGTCTACGTGAGAAATACAAGGAGGATTTCATTTGTCTAGGTAGTCATCTGTATAGCCTATCTACTTCTGCTTCAAGATATCAGAAAGTTCTGGAAGAAAACCGCAAATTATACAATCAGATGCAGGACTTGAAAGGTAATATTAGAGTGTACTGTAGAGTTCGCCCCTTAATAGGACAACAAAACAGTTGTGGCGTTGTCGGTAGTGTAGAGGAAGAAAGTATTTCACTCGTAACGTCTTCTAAGAATGGAAAAGAGGTGAAGAAAACATTTACTTTTAACAAAGTGTTTGGTCCTTCTGCAACTCAAGGGGAGGTTTTCTCAGATACACAACCTCTGATTCGTTCGGTTTTGGATGGATTCAATGTTTGTATATTTGCCTACGGCCAGACAGGGTCAGGAAAAACACACACTATGTCTGGACCAGACAATATTACTGAGGAAACAGTTGGTGTCAACTACCGTGCTTTGAGGGATCTTTTCTGTCTCTTAGAACAAAGGAAAGACACCATTCACTATGATATCTCTGTCCAGATGCTTGAGATATACAATGAGCAAGTTAGAGACCTACTAATGACAGACGCTTCTAACAAAAGATTAGAAATTCGCAACAGTTCCCATAATGGTATTAACGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACTGCTGATGTCTTAAATTTGATGAGCTTGGGACAAAAGAATCGAGCAGTTGGTTCTACTGCCATGAATGATCGGAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTTCATCAGGAAATGGTCTTCGTGGATGTATCCACCTAGTTGATTTGGCAGGAAGTGAGAGGGTTGATAAATCTGAGGTGACAGGAGATAGGCTAAAGGAGGCTCAACATATTAACAAGTCGCTTTCCGCTTTAGGAGATGTAATTTCTGCCCTCGCCCAAAAGCAATCACATGTTCCTTACCGAAACAGTAAACTTACTCAATTACTTCAGGACTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATATTAGCCCGGAGCCTGAAGCTCTTGGAGAAACAATTAGTACACTGAAGTTTGCCGAAAGAGTTTCAACTATTGAACTTGGTGCAGCACGAGCTAATAAAGAGAGCGGCGAAGTGAAAGAGCTGAAGGAACAGATTGCTAGTCTAAAGGCAACCATAGCGAGGATGAAGGATGGAGAGTTGGAGCACTTTAAACAGCCTTCAAATAGAATTACCAGAGGCCGTAAGTTACCAAGAGATGATTGTAGTAGCATTGAGGACCCTAAAAAGGATTCATCAAAGCTAAAAAGTCGAAGCCTTGATATCGGAGACATATATTGGAATTCACCTCCATGGCCAGATCCACATGGTGGGGTAAATGGAAATGAGGATGATAAGGAATCGATTTCTTGTGGAAGTATGTATAGGGATGATAGCTTAACAACTGATGATAGCTTCTCAGTACAGGGGGACACAGAAAGCAAACAATCGTCTTCTCCATTGTGGATGGCCACCACCGCATCCACAAATGATTCTGATGAGTTTGAGTTTGCAACTAGTGTATGTTCAGAACCAGACATGAATTGGCAATCCCATTCACCAAAAGCAACCGCCGTTTCCAGTTTATCAGTGTCTAGACCAAAGAGATCAGTTCATGTCAGACAAGGGAAGAACTTAGAAACCAGGACTACGATCCCATCGATGCTTTCTTCATCACCAAGAAAACATTCCACCTTAGCTAGCCAACCAAGAAAGCATTCAGGTTCAATTGATGCTAAAAGAAGAAGTGGAAATGCCAAATGA 2823 0.4031 MATKPLSILSVVEDVIQKNRSQFDDIDFTSNIRKSEEASSRRNEAAMWLQNIVGGKELLDEPSEEAFRIALRSGIILCNALNKVQPGAVPNVVEAPSDIDNIPDGAALSVYQYFENVRNFLVTMEEMGLPTFDASDLEQGGKSSRIVNCVLALKSYSEWKLEGKNGLWKYGGSPKPQPTIAKIFVRKNSIPFMKSLSRGTASLGDKDGSPSEHSSSIETVLNDAVLNDGSEEGSIPSLYSLVREILHDKKQEEIPFIVESLLNKVMEEFESRAITVQQETMEEIEDVEIKQKQNDDVKYHDDEKSSMQNIIQRQHENIQELKMIVNQTKAGMHCLREKYKEDFICLGSHLYSLSTSASRYQKVLEENRKLYNQMQDLKGNIRVYCRVRPLIGQQNSCGVVGSVEEESISLVTSSKNGKEVKKTFTFNKVFGPSATQGEVFSDTQPLIRSVLDGFNVCIFAYGQTGSGKTHTMSGPDNITEETVGVNYRALRDLFCLLEQRKDTIHYDISVQMLEIYNEQVRDLLMTDASNKRLEIRNSSHNGINVPDANLVPVSSTADVLNLMSLGQKNRAVGSTAMNDRSSRSHSCLTVHVQGRELSSGNGLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVISALAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETISTLKFAERVSTIELGAARANKESGEVKELKEQIASLKATIARMKDGELEHFKQPSNRITRGRKLPRDDCSSIEDPKKDSSKLKSRSLDIGDIYWNSPPWPDPHGGVNGNEDDKESISCGSMYRDDSLTTDDSFSVQGDTESKQSSSPLWMATTASTNDSDEFEFATSVCSEPDMNWQSHSPKATAVSSLSVSRPKRSVHVRQGKNLETRTTIPSMLSSSPRKHSTLASQPRKHSGSIDAKRRSGNAK* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1397 940 Coils Coil 712 739 - -
Tpr1g1397 940 ProSiteProfiles Kinesin motor domain profile. 380 705 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1397 940 SMART ch_5 41 156 IPR001715 GO:0005515
Tpr1g1397 940 ProSiteProfiles Calponin homology (CH) domain profile. 39 158 IPR001715 GO:0005515
Tpr1g1397 940 SUPERFAMILY Calponin-homology domain, CH-domain 36 170 IPR036872 -
Tpr1g1397 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 737 IPR027417 -
Tpr1g1397 940 MobiDBLite consensus disorder prediction 878 940 - -
Tpr1g1397 940 Pfam Kinesin motor domain 386 705 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1397 940 Gene3D - 34 170 IPR036872 -
Tpr1g1397 940 SMART kinesin_4 378 713 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1397 940 MobiDBLite consensus disorder prediction 740 776 - -
Tpr1g1397 940 Pfam Calponin homology (CH) domain 40 158 IPR001715 GO:0005515
Tpr1g1397 940 PRINTS Kinesin heavy chain signature 453 474 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1397 940 PRINTS Kinesin heavy chain signature 575 592 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1397 940 PRINTS Kinesin heavy chain signature 606 624 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1397 940 PRINTS Kinesin heavy chain signature 655 676 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1397 940 MobiDBLite consensus disorder prediction 897 925 - -
Tpr1g1397 940 CDD KISc_C_terminal 378 707 - -
Tpr1g1397 940 PANTHER KINESIN-LIKE PROTEIN KLP-3 5 926 - -
Tpr1g1397 940 PANTHER KINESIN-LIKE PROTEIN KIN-14H 5 926 - -
Tpr1g1397 940 Coils Coil 360 380 - -
Tpr1g1397 940 MobiDBLite consensus disorder prediction 820 850 - -
Tpr1g1397 940 Gene3D Kinesin motor domain 323 707 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1397 Tpr-Chr1 12780229 12786925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1397 368 705 Calmodulin-binding Proteins AT5G65930 42.982 1.76e-77 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1397 K10406 - gmx:100808197 1166.37