Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1376 ATGGATTGCAAGGAAGATCTATTGATCGAAGAAGTCTGCAAGCTCTATGATCAAATCTCAAGCCTAGACACACTCAAACCTTGCGAAAATGTCAACACACTTTTCACCAAACTTGTTCTCACATGCATGCCACCTAGTCCAATTGATGTCACCAAACTAACCACAAAAGTTCAAGAAATTAGGTCCAAACTTATAAGGCTATGTGGTGAAGCTGAAGGCCATTTAGAAAGCCACTACTCAACAATCATAGCTTCATACATTAATCCACTCAATAATCTCAACATTTTCCCTTATTATTCAAACTACCTCAAACTTAGTCTCCTTGAATTCAATATCCTAACCAATCACTCCACTAATGTCCCTAAAAAAATTGCCTTTATTGGCTCAGGTCCACTTCCCCTTACTTCAATTGTCTTAGCCACAAAACACCTTAAAAACACAATCTTTCATAACTATGACATTGACCCTTTAGCCAATTCCAAAGCTTCTTGCTTAATTTCCTCTGATCTTGATTTATCAAAGCGTATGGTTTTTCACACCAATGATATAATGGATGTGTCAAATGGTTTGAAAGAATATGAAGTTGTTTATTTGGCAGCACTTGTAGGAATGAATGTTGAGGAAAAGAATAGAATCATTGATCATTTGGCTAAGTACATGGCACCAGGAGCACTCCTCATGCTGAGGAGTGCTCATGGTGCTCGCGCTTTTCTATATCCAGTTGTTGATACTAATGATCTTGGAGGTTTTGAGGTTCTCTCAGTGTTTCATCCTATGGACGAGGTTATCAATTCGGTTGTCATAGCTCGCAAGTATCCAATGGTTTTATTACCAAATAAGTGTTGTTCTGATGAGGTTCAAGCCTTCAAACCTCTGAGCAACCATGGGAATAACATGATTGAGGAATTGGTCGTGGAAGAGAATTAA 927 0.383 MDCKEDLLIEEVCKLYDQISSLDTLKPCENVNTLFTKLVLTCMPPSPIDVTKLTTKVQEIRSKLIRLCGEAEGHLESHYSTIIASYINPLNNLNIFPYYSNYLKLSLLEFNILTNHSTNVPKKIAFIGSGPLPLTSIVLATKHLKNTIFHNYDIDPLANSKASCLISSDLDLSKRMVFHTNDIMDVSNGLKEYEVVYLAALVGMNVEEKNRIIDHLAKYMAPGALLMLRSAHGARAFLYPVVDTNDLGGFEVLSVFHPMDEVINSVVIARKYPMVLLPNKCCSDEVQAFKPLSNHGNNMIEELVVEEN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1376 308 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Tpr1g1376 308 PANTHER NICOTIANAMINE SYNTHASE 3 1 307 IPR004298 GO:0030410|GO:0030418
Tpr1g1376 308 PANTHER SYNTHASE, PUTATIVE-RELATED 1 307 - -
Tpr1g1376 308 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Tpr1g1376 308 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1376 Tpr-Chr1 12602181 12603421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1376 1 307 Nicotianamine Synthase Gene Family AT1G09240 60.443 3.57e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1376 K05953 - qsu:112028738 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1376 1 12602181 12603421 Tpr1g1376 1 12602181 12603421 ECH