Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1368 ATGGATTCAACTCATTCAAACACCTTTCAAGAATCCAATCACAAAAAACGCCGCAAAATCGGAGACCTAACAACCGATCAAAATTCCCTAAATCTCATGCCATGGAGATCCGAATCAGACCAAAACACCTACTCAAAAAAACTCATCGAAGCACTCCGCCGAATAAATTCACCTGAAACAACAACAACAACCAAACCTAGAGTCGCCGGTCAAGTCCGCGAAACCGCCGATCGAGTTCTCGCTTCAACTGCCAAAGGAAGAACACGCTGGAGCCGCGCGATTCTCGGAAAGTGGAAGAAGCTTCGTAGACATCACAGGAAAGTGAAGAAAGCGAAAGCTGGTAGTGGATTGAATAGAGCAGGGATTGAAAAAGAGAGGTTGAGACGGTTACCGGCTGTGCAGAAGAAAACGCGCGTTTTAGGACGGTTAGTTCCTGGTTGCCGGAAAGTTCCTTTACCGAATCTTCTAGAAGAAGCTACTGATTATATTTCTGCTTTGGAGATGCAAGTGCGTGCTATGACAGCTCTCGCTGACCTTCTCGCCGGTGGTACGTCGGCGGGAATCGCCGGTCAGGTGTTGAGTTGA 585 0.4769 MDSTHSNTFQESNHKKRRKIGDLTTDQNSLNLMPWRSESDQNTYSKKLIEALRRINSPETTTTTKPRVAGQVRETADRVLASTAKGRTRWSRAILGKWKKLRRHHRKVKKAKAGSGLNRAGIEKERLRRLPAVQKKTRVLGRLVPGCRKVPLPNLLEEATDYISALEMQVRAMTALADLLAGGTSAGIAGQVLS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1368 194 MobiDBLite consensus disorder prediction 1 25 - -
Tpr1g1368 194 MobiDBLite consensus disorder prediction 9 23 - -
Tpr1g1368 194 PANTHER TRANSCRIPTION FACTOR BHLH150 10 193 - -
Tpr1g1368 194 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 193 IPR044660 GO:0006355
Tpr1g1368 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 123 182 IPR036638 GO:0046983
Tpr1g1368 194 CDD bHLH_AtIBH1_like 122 177 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1368 Tpr-Chr1 12486326 12487285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1368 11 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.571 1.17e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1368 - - aprc:113873135 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1368 1 12486326 12487285 Tpr1g1368 1 12486326 12487285 ECH