Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1364 ATGTCCGACGACAAACCCGCCACAGACCAATACGGCGTCCTCCTCTATTACAACTACGTCGATATTCCAAACCTCGACGACCTCCTCACATTCTACCGCTCCAATTGCTCCTCTCTCTCCCTCCTCGGCCGTGTTCGTCTCTCTTCCCACGGCGTCAATGTCACCGTTGGTGGCAATTTATCCTCTTTGGAACGACACATTGAAGACCTCAAAGCTAATAGTACTTTATTTCATGGAACTGATTTCAAACTTGCAACTTGTCATCAACCGTTAAACGACGACGTTGCTAAGGAGTGTGGATTCACTTCACTCTCGATTCGAATTGTCAAGGAACTTGTTACTTTGAGTTCTCATCCATTATTGAAGTCACCAGAAATTTCCAATGCTGGAAGACATTTATCAGCACTTGAGTTTCATTCAACCCTTCACAATGCTAATAAGGAGAGTCCAGAAAACAGTCTTGTTTTACTTGATGCAAGGAATCTATATGAAACAAGGATTGGGAAGTTTCATGCACCAAATGTTGAAACTTTGGATCCACAGGTTAGGCAGTACAGCGATTTCTCCTCGTGGATAGATGATAGAGGCGAGCAGTTGAAAGGCAAAAATATCCTCATGTATTGTACTGGTGGAATCAGGTGCGAAATGGCATCAGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTATTTCAAAGGAAAGAATTTTGTTTTTGATCACAGGATATCAGTTGGAGGTTCAGATGCTAGTACAATTGGTACCTGTCTTATGTGTCAATGTTCCTTTGACGATTACTCTTCACGCTGTCGATGTACTTATTGCAGAATGCTTGTCTTGGTTTGCCATAGTTGCCAGAATGAATCTGCACAGTACGTTTGTGAGCTATGCCAAAAACAGGGTAAGGCTGTTGGGTCAAAGCAGTTAATTGAAAATGATGATTCAGAAAAATCTCTGCCAGATGTTGAGTTCCAGAATTTATCTTCAGATACTATGCTCTTGTCTCAAGCGCCTAGAGGGGACGACGTAAGCACCTCAAGAAAACTGAGAATCTTATGCTTGCATGGGTTTCGGCAGAATGCTTCCGGTTTTAAGGGAAGGACTGCATCGTTAGCCAAAAAACTCAAGAAAATTGCTGAATTTGTTTTTATAGACGCACCTCATGAGGTGCCCTTCATTTATCAAACACCAGTGCCAGTGCCCCAGGTTAATGGTGCATTGTCCTCTTTGCCAGCTAGTCCACCTCCACCTATGGAGAATTGCAAGAAGAAGTTCTCATGGTTTGTAGCACCTAATTTTGAGGGAAGTAGTGGTGTTGAGTGGAAGGTAGCAGACGGTCCATTTGATCCGCTTCAATACCAGCAACAAACTGGTGGATGCGATATTTCAATATCACACTTAGAGAACGTGTTCTCCCAAGAAGGGCCGTTTGATGGAATCTTGGGTTTTTCACAGGGAGCAGCAATGACTGCGGTAATCTCTGCACAACAAGAAAAGCTAAAAGGTAAAATGGACTTTAAATTTGTAGTCTTGTGCTCAGGCTTTGCTCTGCATTTGAAGGAGATGGAGTGTAGCCCTATCAAGTGTCCCTCTCTTCATATTTTTGGTAATGAACATGGTCAAGACAGACAGATAGCCAACCAAACAAGCAAGGAACTGGCTTCTCTATATGACAGTGGTTGTTCTGTGATCGTTGAACATGACTGTGGTCATATAATTCCTACTCGGTCCCCATATATTGACGAGATCAAGGCTTTCCTTGGGCGATTTCTGTTGGTCAAAAAATTGTACAATGCCCTATGGTAA 1863 0.4278 MSDDKPATDQYGVLLYYNYVDIPNLDDLLTFYRSNCSSLSLLGRVRLSSHGVNVTVGGNLSSLERHIEDLKANSTLFHGTDFKLATCHQPLNDDVAKECGFTSLSIRIVKELVTLSSHPLLKSPEISNAGRHLSALEFHSTLHNANKESPENSLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDFSSWIDDRGEQLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGYFKGKNFVFDHRISVGGSDASTIGTCLMCQCSFDDYSSRCRCTYCRMLVLVCHSCQNESAQYVCELCQKQGKAVGSKQLIENDDSEKSLPDVEFQNLSSDTMLLSQAPRGDDVSTSRKLRILCLHGFRQNASGFKGRTASLAKKLKKIAEFVFIDAPHEVPFIYQTPVPVPQVNGALSSLPASPPPPMENCKKKFSWFVAPNFEGSSGVEWKVADGPFDPLQYQQQTGGCDISISHLENVFSQEGPFDGILGFSQGAAMTAVISAQQEKLKGKMDFKFVVLCSGFALHLKEMECSPIKCPSLHIFGNEHGQDRQIANQTSKELASLYDSGCSVIVEHDCGHIIPTRSPYIDEIKAFLGRFLLVKKLYNALW* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1364 620 ProSiteProfiles Rhodanese domain profile. 150 250 IPR001763 -
Tpr1g1364 620 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 7 609 - -
Tpr1g1364 620 SMART rhod_4 140 247 IPR001763 -
Tpr1g1364 620 Pfam Rhodanase C-terminal 252 317 IPR022111 -
Tpr1g1364 620 Gene3D - 122 278 IPR036873 -
Tpr1g1364 620 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 7 609 IPR020936 -
Tpr1g1364 620 Pfam UPF0176 acylphosphatase like domain 12 111 IPR040503 -
Tpr1g1364 620 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 120 264 IPR036873 -
Tpr1g1364 620 Pfam Serine hydrolase (FSH1) 366 601 IPR005645 -
Tpr1g1364 620 Gene3D alpha/beta hydrolase 363 611 IPR029058 -
Tpr1g1364 620 Gene3D - 1 113 - -
Tpr1g1364 620 SUPERFAMILY alpha/beta-Hydrolases 365 610 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1364 Tpr-Chr1 12454363 12458566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1364 9 610 Sulfurtransferasese or Rhodanese AT1G09280 62.376 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1364 - - mtr:MTR_1g084180 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1364 1 12454363 12458566 Tpr1g1364 1 12454363 12458566 ECH