Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1361 ATGGCACCCAAATCCAAAACACGCGCCTCCTCCGAAGCTTCTGAATTCTTCAAACCTGGAACCTTAATCGAAATCAGCTCCGACGACGACGGATTCCGCGGTTCTTGGTTCTCCGGCAAGATCCTCCGTCGCGTCTCCGCCGACAAATTCATGATCGAGTACGATACTTTGATGGAAGACGACAAAGGAACTAAACCTCTCAAAGAAACCCTGAAGCGTCACCAGCTCCGACCAATTCTCCCAACGGAGACTAACCGGGAATTCAAATTCGGCGATGAAGTTGATGCGTATCATAATGATGGATGGTGGGAAGGTCACATTACCGAGGAATTGAAGGATGGAAGATTCGCTGTGTATTTCAGAGTCTCAAGGGAGCAGATCGTGTTCACCAGCGAGGAACTCAGACTTCACCGTGAATGGATCGATGGAAAATGGGTTCCACCATTTCCACAACAGGAAGATAATGATAATGATAATGAAACTGAGAAAGTGAAAACTAAGCGTGTGAAGGCTGCTGAAACTGTGACTGTAGAGAAGGATGATTTTAAGTTTAACGAAGGGGCGTTGGTTGAGGTTTGTAGCGACGAAGATGGTTTCAAAGGGGCTTGGTTTTGTGGCACCATTGTTGAGTTAAAGGGAAAATCTAAGTTTGTTGTTGAGTACGATAGCCTGGTTGATGATGATTCAAAACTATTGAGAGAGGAGATTAGTATCTTGCATGTCAGGCCTCGCCCTCCAATAACTGCTGATGTTGCTGAGTTCAAGTTTCTTGACGAAGTTGATGCTTTTTACAATGACGGTTGGTGGGTTGGTCTTGTTGCTAAGGTTCTTGGGGACTCGAAGTATGTTGTTTATTTCAGGAACTCTAATGAAGAGCTGGAGTTTCAGCATTCTCAGTTGAGGCTACATCAGGATTGGATGGATGGCAAATGGGTCATGGCTTCTAAGGCGTTGAAAGTTTGA 963 0.4528 MAPKSKTRASSEASEFFKPGTLIEISSDDDGFRGSWFSGKILRRVSADKFMIEYDTLMEDDKGTKPLKETLKRHQLRPILPTETNREFKFGDEVDAYHNDGWWEGHITEELKDGRFAVYFRVSREQIVFTSEELRLHREWIDGKWVPPFPQQEDNDNDNETEKVKTKRVKAAETVTVEKDDFKFNEGALVEVCSDEDGFKGAWFCGTIVELKGKSKFVVEYDSLVDDDSKLLREEISILHVRPRPPITADVAEFKFLDEVDAFYNDGWWVGLVAKVLGDSKYVVYFRNSNEELEFQHSQLRLHQDWMDGKWVMASKALKV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1361 320 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 11 315 - -
Tpr1g1361 320 Pfam Agenet domain 20 81 IPR008395 -
Tpr1g1361 320 Pfam Agenet domain 91 151 IPR008395 -
Tpr1g1361 320 Pfam Agenet domain 187 246 IPR008395 -
Tpr1g1361 320 SMART agenet_At_2 15 84 IPR014002 -
Tpr1g1361 320 SMART agenet_At_2 252 308 IPR014002 -
Tpr1g1361 320 SMART agenet_At_2 182 251 IPR014002 -
Tpr1g1361 320 SMART agenet_At_2 86 142 IPR014002 -
Tpr1g1361 320 Gene3D - 174 254 - -
Tpr1g1361 320 PANTHER AGENET-LIKE DOMAIN, AGENET DOMAIN, PLANT TYPE-RELATED 11 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1361 Tpr-Chr1 12432534 12436121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1361 194 306 PHD Transcription Factor Family AT5G58610 30.370 1.01e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1361 - - aprc:113871596 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1361 1 12432534 12436121 Tpr1g1361 1 12432534 12436121 ECH