Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1355 ATGAGTGCTAATAATGGAAATTCAGTTCCGAAGCCATTAACGGTTGAGATCAAAGAGCTGAAATTCACTTATCCTGGAATCGACGGTCATCCTCCTCCGGGTTCTAAACCTCTCATCGAACATTTCTCTCTCAACCTCTTCTCCGGTGATCGTTGCCTTCTCGTCGGATCCAATGGCGCAGGTAAAACCACAATTCTGAAGATATTAGGAGGGAAACACATGGTGGAACCTGAAATGGTTCGTGTTCTTGGTAGATCAGCTTTTCATGATACTGCTTTATCATCTTCTGGTGATTTGTGTTATCTTGGTGGTGAGTGGAGGAGAGATGTTGCTTTTGCTGGTTTTGAAGTTCCAATACAGATGGACATTTCTGCTGAGAAAATGATATTTGGTGTGGCTGGGATTGATCCTGAAAGAAGAGCAGAGCTTATTAAGGTATTAGATATCAATCTTTCATGGAGATTACATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAAACCTTTCAAGGTCCTTCTTCTGGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTGAAGTTTTTAAAAAAGGAATGTGATGAGAGAGGTGCCACTATTATATATGCAACACATATATTTGACGGTCTTGAGGATTGGCCAACAAATATTGTTTATGTTGCTCATGGAAGGCTGCAACTAGCATTGCCCATAGAGAAAGTCAGAGAAACTAGCAAACTGTCACTAATGAGAACAGTAGAAGCTTGGCTACGGAAGGAACGAGACGAAGATAGAAGAATAAGGAAAGAAAAGAAGGCTGCTGGCCTTCCTGAATTTGAAAAGCAAGTTGAGGGAAGTCGTGTAGTTGGGGGGGATCCTGCACGAGCTTCAGTTCGAGTTACTAATAATGGCTGGGCCGCAGGCAGGTTACATTCCACCGTTGCTGGCGAAGAAAATTTCCTCCTAAGCTCAAACCGAGTATTGAGGGGGTAA 1005 0.4259 MSANNGNSVPKPLTVEIKELKFTYPGIDGHPPPGSKPLIEHFSLNLFSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFHDTALSSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLKKECDERGATIIYATHIFDGLEDWPTNIVYVAHGRLQLALPIEKVRETSKLSLMRTVEAWLRKERDEDRRIRKEKKAAGLPEFEKQVEGSRVVGGDPARASVRVTNNGWAAGRLHSTVAGEENFLLSSNRVLRG* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1355 334 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 14 333 - -
Tpr1g1355 334 Gene3D - 10 290 IPR027417 -
Tpr1g1355 334 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 258 IPR003439 GO:0005524
Tpr1g1355 334 Pfam ABC transporter 41 185 IPR003439 GO:0005524
Tpr1g1355 334 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 14 333 - -
Tpr1g1355 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 250 IPR027417 -
Tpr1g1355 334 SMART AAA_5 48 235 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1355 Tpr-Chr1 12392833 12396161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1355 15 212 Calmodulin-binding Proteins AT2G36910 24.186 7.66e-09 55.5