Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1328 ATGGCGGCATTGTCTTTTTCAGTTGCATCTGTTGTTGAGGATGTTCTTCAACAACATGGTACTCGTCTCAAAGATCTTGATTTGGAATCTAGAAAATCAGAAGAAGCTGCATTCAGAAGATATGAAGCAGCAGGGTGGTTGAGGAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCTTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTTTGTAATGTTCTTAACAAGCTTCAACCTGGTGCTGTATCCAAGGTTGTGGAGAGTCCTGTTGATTCTGGACTAATCCCGGATGGAGCGCCATTATCGGCCTTTCAGTATTTTGAAAATGTTAGGAACTTTCTGGTGGCTATTCAGGAAATTGGAATTCCTACCTTTGAATCATCTGATCTGGAACAAGGAGGAAAATCGTCGAGGATTGTGAACAGTGTATTGGCCCTTAAATCTTATAGTGAATGGAAACAAACTGGGGCTAATGGTGTGTGGAAATTTGGTGGAACTATCAAACCTGCAATCAGTACAAAATCTTTTGTGAGGAAAAACTCGGAGCCATTTACCAATTCGTTGTCAAGAACCAATTCGTTGTCAAGAACCTCTTCAATCAATGAAAAAAATGAAAAATCTATGACTGCTTTTGCCTCTGATGTTGAGTCTAATAAAATGTCTAGTTCTCATTCTTTAGGTATGCTTGTTCGTGCAATATTATTCGATAAGAAGCCAGAAGAAGTTCCAACGTTGGTTGAATCTGTTTTGACTAAAGTCGTGGAGGAGTTCGAGCATCGCATTGCAAGCCAGGATGAACAGACAAAAACAACTTCAAGAGGTGCAGTGTCCCAAAGCAATGGAGCTGTATCAAAGTTTACTATGGCACATAAAAAGGTGGATAACAAGATTTCTATAGTAACAAAGAAAGAGGAATTCATCCATAAAAACCATGTTGCTGATGAGGAATCAAAGAAACAACTTATGAAGCAGCAAATGCTCTTTGATCAACGGCAAAAAGATATTCAAGAGTTAAAGCATACAGTTCAAACCACCAAAGCTGGTATGCAATTCATGCAAATGAAATTTCATGAGGAGTTCTCCAATTTAGGCATGCACATTCATGGTTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTCGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGGAGTATTAGGGTGTACTGTCGAGTAAGACCTTTCTTATCTGGACAACCAAACCATTTGAGTACCGTAGAGAACATAGAAGATGGAGTTATCACAATTAATGTTCCGTCAAAGAATGGGAAAGGGCGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAGCTCAAGGGGAGGTCTTCGCTGATATGCAGCCACTCGTTAGGTCTGTTCTTGATGGTTTTAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTTCACCATGACTGGACCAAAAGAGATCACAGAAAAAAGCCAAGGTGTAAATTATAGGGCTCTAAGTGATCTGTTTTATACAGCAAATCAAAGAAAGGACACTTTTCGCTATGATGTGTCTGTTCAGATGATTGAAATTTATAATGAGCAAGTCAGAGATCTATTGGTTACGGATGGAACAACCAAAAGGTTAGAAATTCGTAGTAACTCTCAAAGAGGGCTCAGTGTACCAGATGCAAGCCTTGTCCAAGTATCATCAACGAATGATGTTATTGAACTAATGAACTTGGGCCATAAGAACCGTGCAGTTGGAGCAACAGCCCTTAATGACCGTAGTAGCCGATCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAGCTGTCCTACGCGGATGCATGCATCTCGTTGACTTGGCAGGAAGTGAGAGGGTCGACAAATCTGAGGCGACAGGTGATAGACTGAAAGAGGCACAGCATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATAGCTTCTCTAGCTCAGAAAAACCAACATGTCCCTTATAGAAATAGCAAACTCACGCAATTACTCCAAGATTCGCTTGGAGGACAGGCGAAGACACTAATGTTTGTTCACATTAGTCCAGAGACTAATGCTATTGGAGAAACAATTAGCACACTAAAATTTGCAGAAAGAGTTGCGACAGTTGAACTTGGCGCTGCTCGAGTAAACAAGGACGGGGCAGATGTCAAAGAGCTCAAAGATCAGATTGCTAGCCTTAAGGCAGCATTGGCAAGAAAGGAAGGAAATTCAGAACATTCGATATCTGGCAGCCCTGGAAAATATAGGACAACGGCTAGTGAACTATCACCCTATCATGCAAGCCAGCGGGCCGCAGGTATCGTGGATGGTCCCTTTGGGTGCCGACAACCAATGTTTGATGTTGGAAGCTTAGAGAGCAATACTACATTGAGGCAAAAAACTCAGAGCTTTGAATTTGATGAGATATTAACAAATTCACCACCGTGGCCGCCAGTGAATGGTCTTGTTCAAAACTGTGTGGAAGATGATGATAAAGAAACCGGTACAGGAGAGTGGGTTGATAAGGTCATGGTAAACAAGCTAGATGTGAACAAAACCGGTAACATGTTAGGGTGTTGGGAACCAGATAATGGGAATTTATCCGAGGAATTTTATCAAAAATATCTCCAAGATTCTTCCAAAGTATACTCGGAGCGATCTTACAATATGTTCATGAGAGGCAACCAGTTTAACATTGCTGGTTCAGATGATGCTGATGATGTTGATGCTGCAACTAGTGATTCCTCAGAACATGACTTGCTTTGGCAATTTAATCATTCCAAAGTTACAAGCATAGCCAATGGTAATGAATCAAAGGGTAGGAAACTTGTCTCAAAGTCAGCAAAAAGCCCAGCAGCATTGAGCAAGAATAGTATTCATTCGTCTACTGCTCCTTCACCTTCACGGAAACAAACGAATGGTGTCTCACATCGAACACCAACAAGACAACCAGTTCCTGTTGACATAAAGCGTAAAACTGGGACTAGAAAGTGA 3057 0.4122 MAALSFSVASVVEDVLQQHGTRLKDLDLESRKSEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKLQPGAVSKVVESPVDSGLIPDGAPLSAFQYFENVRNFLVAIQEIGIPTFESSDLEQGGKSSRIVNSVLALKSYSEWKQTGANGVWKFGGTIKPAISTKSFVRKNSEPFTNSLSRTNSLSRTSSINEKNEKSMTAFASDVESNKMSSSHSLGMLVRAILFDKKPEEVPTLVESVLTKVVEEFEHRIASQDEQTKTTSRGAVSQSNGAVSKFTMAHKKVDNKISIVTKKEEFIHKNHVADEESKKQLMKQQMLFDQRQKDIQELKHTVQTTKAGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFLSGQPNHLSTVENIEDGVITINVPSKNGKGRRSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFYTANQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTTKRLEIRSNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPETNAIGETISTLKFAERVATVELGAARVNKDGADVKELKDQIASLKAALARKEGNSEHSISGSPGKYRTTASELSPYHASQRAAGIVDGPFGCRQPMFDVGSLESNTTLRQKTQSFEFDEILTNSPPWPPVNGLVQNCVEDDDKETGTGEWVDKVMVNKLDVNKTGNMLGCWEPDNGNLSEEFYQKYLQDSSKVYSERSYNMFMRGNQFNIAGSDDADDVDAATSDSSEHDLLWQFNHSKVTSIANGNESKGRKLVSKSAKSPAALSKNSIHSSTAPSPSRKQTNGVSHRTPTRQPVPVDIKRKTGTRK* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1328 1018 CDD KISc_C_terminal 403 732 - -
Tpr1g1328 1018 SMART ch_5 39 157 IPR001715 GO:0005515
Tpr1g1328 1018 Coils Coil 744 764 - -
Tpr1g1328 1018 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1015 - -
Tpr1g1328 1018 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 762 IPR027417 -
Tpr1g1328 1018 Gene3D - 24 182 IPR036872 -
Tpr1g1328 1018 PRINTS Kinesin heavy chain signature 478 499 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1328 1018 PRINTS Kinesin heavy chain signature 600 617 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1328 1018 PRINTS Kinesin heavy chain signature 631 649 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1328 1018 PRINTS Kinesin heavy chain signature 680 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1328 1018 ProSiteProfiles Kinesin motor domain profile. 405 730 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1328 1018 Pfam Kinesin motor domain 411 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr1g1328 1018 Gene3D Kinesin motor domain 400 771 IPR036961 -
Tpr1g1328 1018 MobiDBLite consensus disorder prediction 954 1018 - -
Tpr1g1328 1018 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Tpr1g1328 1018 SUPERFAMILY Calponin-homology domain, CH-domain 40 170 IPR036872 -
Tpr1g1328 1018 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1015 - -
Tpr1g1328 1018 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Tpr1g1328 1018 MobiDBLite consensus disorder prediction 971 1001 - -
Tpr1g1328 1018 SMART kinesin_4 403 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1328 Tpr-Chr1 11943551 11950134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1328 393 730 Calmodulin-binding Proteins AT5G65930 42.733 3.74e-78 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1328 K10406 - gmx:100801279 1642.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1328 1 11943551 11950134 Tpr1g1328 1 11943551 11950134 ECH
Tpr6g0496 6 4082087 4088412 Tpr1g1328 1 11943551 11950134 PCT