Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1307 ATGGTTGGTTATTTGTCCAGTATACTTGGGTATGCTGAGAAATGTGACAGCTACTTGATTTTTAGTGGAGAAACTGCTCTTGGGAATAGTGTTAGGATAGTTTTGTATTTTCTTGGTCTTGCCTATTGTTTCATTGGGTTATCGGCAATAACGGCCCGATTCTTTCAATCTATGGAAAATGTTGTCAAGCATTCAAGGGAGGTAGTGGTGATAGATCCTGTTACTAAAGCTGAAATTATTACACATGAAAAAGTTTGGAATTATACAATTGCAGATATTAGTTTGTTGGCCTTTGGAACCAGTTTTCCTCAGATATCGTTGGCTACTATTGATGCTATACGAAATCTAGGGAATCTCTATGCTGGAGGTTTGGGACCTGGAACACTCGTGGGTTCTGCTGCGTTTGACCTCTTCCCCATCCACGCTGTTTGTGTAGTAATTCCAAAAGCTGGAGAGTTGAAAAAGATTGCTGATCTAGGAGTATGGATCGTGGAGTTATTTTGGTCATTTTGGGCTTATATTTGGTTATACATCATTTTGGAGGTATGGACTCCAAACGTGATAACTTTGTTGGAGGCCTTGTTGACAGTACTTCAGTATGGATTACTGTTAATTCATGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCTCTACCTATTGCAAGAGATGAGAGGCCAGAAGATTGGGTTCCGGAAGAGATTCCTAGACAAAAGTCCCTTGAGACAGTGGAGTGCTCTGAGATAACTCATTTTAATGAAGAGAACAGGGACACTGTTGATATTTTTTCCATTCATTCAGAAAACTCAAGAGATACATACGTAAGAGTACCACAAACAGACGATGCAGAAAATTCTGGCAAATTTATGGAAACAGAGCTTGAGGATACCTGTTTGCTTACTATTTGGAGACAGCAATTTGTGGATGCACTGACGGTCTGTAATTTTTTTCAACAGGTGGAGAGCCAAAAATCTAAAAAGATGGACAATATCTATACCCGCATAGCTAAAATTTTCTGGCAGTTGTTGCTTTTACCATGGAGATTTATGTTTGCTTTTGTTCCCCCATGCCATATTGCTCATGGTTGGATTTCTTTCATTTGCTCTCTGATTTTCATCAGTGGGATAGCTTACATTGTGACTAAGATAACAGATCTTATAAGTTGTGTCACAGGAATAAATGCCTACGTCATAGCATTTACAGCACTAGCCGGTGGAACCTCATGGCCTGATTTAGTGGCGAGCAAGATTGCTGCTGAACGTCAAAAAACAGCAGACTCTGCAATTGCAAACATCACTTGCAGTAATTCAGTGAATATATATGTCGGCATTGGTGTTCCATGGCTTATAGATACTTTGTACAATTTCATAGCATATAGAGAACCTCTTCGAATCCAAAATGCAGGGGGACTTAGCTTTTCATTGATTGTTTTCTTTGCCACTTCTGTTGGATGTATATCAGTTTTGGTTCTTAGGCGTATAGTTTTTGGCGCAGAGCTTGGAGGACCAAGGCTTTGGGCATGGATTACCTGCGCATTTTTCATGCTGCTCTGGGTTATTTTTGTTGTACTGTCTTCACTTAAGGTTTCTGGATTCATTTAG 1602 0.3976 MVGYLSSILGYAEKCDSYLIFSGETALGNSVRIVLYFLGLAYCFIGLSAITARFFQSMENVVKHSREVVVIDPVTKAEIITHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNLGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVIPKAGELKKIADLGVWIVELFWSFWAYIWLYIILEVWTPNVITLLEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPEDWVPEEIPRQKSLETVECSEITHFNEENRDTVDIFSIHSENSRDTYVRVPQTDDAENSGKFMETELEDTCLLTIWRQQFVDALTVCNFFQQVESQKSKKMDNIYTRIAKIFWQLLLLPWRFMFAFVPPCHIAHGWISFICSLIFISGIAYIVTKITDLISCVTGINAYVIAFTALAGGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQNAGGLSFSLIVFFATSVGCISVLVLRRIVFGAELGGPRLWAWITCAFFMLLWVIFVVLSSLKVSGFI* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1307 533 Gene3D - 307 527 IPR044880 -
Tpr1g1307 533 Gene3D - 88 223 IPR044880 -
Tpr1g1307 533 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 11 214 - -
Tpr1g1307 533 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 301 533 - -
Tpr1g1307 533 PANTHER SODIUM/CALCIUM EXCHANGER 11 214 - -
Tpr1g1307 533 PANTHER SODIUM/CALCIUM EXCHANGER 301 533 - -
Tpr1g1307 533 Pfam Sodium/calcium exchanger protein 362 525 IPR004837 GO:0016021|GO:0055085
Tpr1g1307 533 Pfam Sodium/calcium exchanger protein 36 208 IPR004837 GO:0016021|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1307 6 533 Antiporters AT2G47600 71.161 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1307 K03452 - gmx:100792839 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1307 1 11757370 11763520 Tpr1g1307 1 11757370 11763520 ECH