Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1283 ATGATGGCAACAATAAAAGTACACGGAAGCCCCTACTCAACGGCAACAATGCGGGTTACTGCAACTCTTTGTGAAAAACAGCTTGAATTTGAGTTACTTTACATTAACGTAAGGAATGGTGATCACAAAAAGGAACCTTTCTTATCACACAATCCATTTGGTCAAGTTCCTGCATTTGAAGATGGAGATTTAAAGCTCTTTGAATCAAGAGCAATAACACAATATATTAATCATGAGTATGCTGATAAAGGAACTAAGTTAACAATCAGTGAATCCAAGAAAATGGCAATAATGTGGATGTGGTCAGAAGTGGAGAGCCTACACTTTGATCAAGCAGCATCAAAACTTGTTTGGGAACTTGGGATAAAACCTTTATTTGGAGCACCTTTGGATCCAAAAATTGTGGAAGAGAATGAAGCTAAGTTGGATAGTATTCTTAGTGTGTATGAGAAAAGATTGTCTGAATCCAAATACTTGGGAGGTGAATGTTTCACCTTGGTAGATTTGCATCACTTACCCTCACTTCATTATTTGATGAAGTCACAGATTAAGAAGTTGTTTGAATCAAGACCCTATGTTAGTGCTTGGGTGGCTGATATTACTGCAAGACCAGCTTGGGCTAAAGTCATAGCAATGATACCTAATTAA 648 0.3735 MMATIKVHGSPYSTATMRVTATLCEKQLEFELLYINVRNGDHKKEPFLSHNPFGQVPAFEDGDLKLFESRAITQYINHEYADKGTKLTISESKKMAIMWMWSEVESLHFDQAASKLVWELGIKPLFGAPLDPKIVEENEAKLDSILSVYEKRLSESKYLGGECFTLVDLHHLPSLHYLMKSQIKKLFESRPYVSAWVADITARPAWAKVIAMIPN* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1283 215 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Tpr1g1283 215 SUPERFAMILY Thioredoxin-like 2 84 IPR036249 -
Tpr1g1283 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
Tpr1g1283 215 SUPERFAMILY GST C-terminal domain-like 83 210 IPR036282 -
Tpr1g1283 215 Gene3D - 90 215 - -
Tpr1g1283 215 SFLD Glutathione Transferase (cytosolic) 2 212 IPR040079 -
Tpr1g1283 215 SFLD Main.5: Phi-like 2 212 - -
Tpr1g1283 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Tpr1g1283 215 CDD GST_N_Phi 4 78 - -
Tpr1g1283 215 CDD GST_C_Phi 93 210 IPR034347 -
Tpr1g1283 215 Pfam Glutathione S-transferase, C-terminal domain 115 204 IPR004046 -
Tpr1g1283 215 Gene3D Glutaredoxin 2 88 - -
Tpr1g1283 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 213 - -
Tpr1g1283 215 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 4 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1283 Tpr-Chr1 11523949 11525453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1283 2 210 Glutathione S-transferase Gene Family AT1G02930 58.852 1.09e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1283 K00799 - gmx:100799868 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1283 1 11523949 11525453 Tpr1g1283 1 11523949 11525453 ECH