Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1282 ATGACAACAATAAAAGTTCATGGAAGCCCCTTATCAACAGCCACCATGCGTGTTACTGCAACTCTTTATGAAAAACAGATTGAATTTGAGTTTGTTGACATTAACCTGAGGAATGGTGATCACAAAAAGGAACCTTTCATATCACTCAATCCATTTGGTCAAGTTCCAGCATTTGAAGATGGAGACTTAAAACTCTTTGAATCGAGGGCGATAACACAATATATTGATCACGAGTATGGTGATAAGGGTACTAAGTTAACAATCAGTGACTCCAAGAAGAAGGCAATAATGGGGTTATGGTCAGAAGTTGAAAGCCACCACTTTGATCAAGTAGCAACAAAACTTGTTTGGGAATTGGGGTTCAAACCTTTATTTGAAATACCTTTGGATACAAAAATTGTGGAAGAGAATGAAGCTAAGTTGGATAGTATTCTTAATGTGTATGAGAAAAGATTGTCTGAGTCCAAATATTTGGGAGGTGAGAGTTTCACCTTGGTGGATCTGCATCACTTACCTTGTCTTCATTACTTGATGAAGTCACAGATCAAGAAGTTGTTTGAATCAAGACCCTATGTTAGTGCTTGGGTGGCTGATATCACTGCAAGACCAGCTTGGTCTAAAGTCATTGCCATGATACCTAATTAA 645 0.3798 MTTIKVHGSPLSTATMRVTATLYEKQIEFEFVDINLRNGDHKKEPFISLNPFGQVPAFEDGDLKLFESRAITQYIDHEYGDKGTKLTISDSKKKAIMGLWSEVESHHFDQVATKLVWELGFKPLFEIPLDTKIVEENEAKLDSILNVYEKRLSESKYLGGESFTLVDLHHLPCLHYLMKSQIKKLFESRPYVSAWVADITARPAWSKVIAMIPN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1282 214 Gene3D - 89 214 - -
Tpr1g1282 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Tpr1g1282 214 SFLD Glutathione Transferase (cytosolic) 1 211 IPR040079 -
Tpr1g1282 214 SFLD Main.5: Phi-like 1 211 - -
Tpr1g1282 214 CDD GST_C_Phi 92 209 IPR034347 -
Tpr1g1282 214 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Tpr1g1282 214 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 212 - -
Tpr1g1282 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 212 - -
Tpr1g1282 214 Pfam Glutathione S-transferase, C-terminal domain 114 203 IPR004046 -
Tpr1g1282 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Tpr1g1282 214 SUPERFAMILY GST C-terminal domain-like 82 209 IPR036282 -
Tpr1g1282 214 Gene3D Glutaredoxin 2 87 - -
Tpr1g1282 214 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1282 Tpr-Chr1 11520685 11521861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1282 1 209 Glutathione S-transferase Gene Family AT1G02930 59.330 1.16e-87 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1282 K00799 - gmx:100799868 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1282 1 11520685 11521861 Tpr1g1282 1 11520685 11521861 ECH