Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1269 ATGTTACCTGTCTTTTGGTCTATATGCCGCCTTGTCTTGTTTCATCTCTTTACTTTAAATTTCCTAAACAAATCGGCCTCTGCCTTAGGAAACGAGACTGACTATTCTGCATTAATCATATTCAAAAAATCAATAACGAGTGATCCTTTGGGAGTATTAAACTCTTGGAATAGTTCTAGCCACTTTTGCAAGTGGCATGGAGTAACTTGCAGTCGAAAACATCAAAGAGTCACAGAGATAAAGTTGGCAGGATATCAGCTGCGAGGTGTTATATCACCTCACGTTGGTAATCTTTCCTTTCTGAGGATCCTCTACCTTGATAATAATCGCTTCCATGACAATATGCCGCGAGAATTAGGCCGTTTATTTCGACTGCAGGCCATCTCTTTGGAAAATAACACTTTACAAGGTCAATTTCCAATCAGTTTGACAAATTGCTCTCAACTGGGGGAGATTGGATTAGATGGGAATCATTTTATTGGCCAAATACCAATGGAGATTCACTCCCTTACCAAGCTTCATTTTTTCAGTGTTGCAAAAAACAATCTAACCGGTCGGATTCCACCATGTATTTGGAATCTTTCTTCCCTCACTTCTCTTTCTTTTGCTTATAACTACTTGGAGGGAAACATACCGGAAGAAATAGGCCTTTTAAAAAACTTAACCGTGATGTCAGTGTCACAAAACAGATTATCTGGTACACTTCCCTTATCACTTTTCAATATGTCATCTCTCACTGACCTCTACACAGCAGGCAATCAATTCCATGGTTCTCTTCCAACCAACATGTTCACAACCCTCCCAAATCTTAGGCAATTTCTGTTTGGCTCGAATCAATATTCAGGTCCAATCCCAACGTCCATCAGTAATGCATCTCGGATGCAATTGTTTGATATTGGTCTAAACAATTTTGTAGGACAAATTCCAAATCTTCGGAAACTACAAGATCTCTTTATTTTTGCCGTAGACGCAAATCATCTTGGCAGCAATTCATCGTCCAGTGGTGATGACTGGGAGTTTATAAAATCTTTGGTAAACTGTAGTAAACTTGATATAGTATTTGTTCAGGATAATAACTTTGGAGGTCCTTTGCCCAAAGTTATTGGCAATTTGTCCACTCATCTCTCACAACTTGCTATGGCTGGCAATCTGATATCTGGAAAAATTCCATCAGAACTGGGAAATCTTGTAAACTTGATTTACCTGTCCATAGAGGACAACCTCTTAATTGATGTTATTCCAGAGAGTTTTTCTAAGTTTCATAAAATGCAAGAATTGTCTTTAAAAATAAACAAACTTTCGGGTGAAATTCCGGCAGCTATTTTAGGAAATCTCAGTCAATTGTCTCTGTTGGATTTATCATACAATTTGTTGGTTGGAAAGATTCCCTCAACTATTGGAAATTGCAAAACGTTGCAAGCAGTAGACTTTTCAATGAACAACCTTAGTGGAGCTATACCAACAGAACTTCTTGGCCTTTCCTCATTATCAATACTACTCAACCTATCACACAACTCATTAAGTGGTAATTTGCCTCCTGAGGTGGGCTTGCTTCGAAACATTGGAGTGCTTGATATCTCAGAAAATCATCTCTCTGGTGGCATTCCTGCAATAATTGGAGATTGCTTAAGCTTGGAATACCTTTTTTTAGAGGGTAATTCTTTAGATGGAAACATACCATCTTCTTTATCTTCACTAAAAGGTCTTCTACAACTTGACCTATCGAGGAACAACTTGTCTGGTTCAATTCCACAAGAATTACAAAATATTTCTGCATTAGAATGGTTCGATGCTTCTTTTAACAAGTTGGAGGGTGAGGTTCCCTTGCTTGGCATTTTCCAGAATGCTAGTAGAGTTTCACTGACCGGAAATGACAGGCTTTGTGGCGGAGTAGCAAAACTGAATCTGCGACTTTGCCCGCCAAAAGATGTGAAAAAGAGAAAACACCATACCCACCGCAAGTTGATCATAATCATCTTCTCAATTGCATTTCTTCTTCTACTGTCATTTGTCCTTACTTTCATCATCTATAAGCTAATGAGGAAAAGGCAGAGAAAAGCATCCACTGATTCAACAATTGAGCAACTTCCAAAGGTATCATACCAAGAACTACACCATGCCACTGATGGATTCTCTGGTCAGAACTTGATAGGAACTGGAGGTGTAGGTTTTGTGTACAAAGGAAGACTTAATTCAGAAGAAAGAGTTGTTGCAATAAAGGTTCTAAACCTTCAGAAGAAAGGAGCTCATAAAAGTTTCATTGCCGAATGTAATGCTTTTAGAAATATCAGGCATAGAAATCTAGTCAAGATTATCACATGTTGCTCGAGTGTGGATCACAAAGGTAATGACTTTAAAGCAATAGTTTATGAATACATGACAAATGGAAGCTTAGAGGAATGGTTGCATCAAAATGTAGAACAACAAAGAACACTGAAATTGGAAAAAAGATTGGAAATTGTTTTTGGAATTGCTTCTGCATTACACTATCTTCACTATGAATGTGAAAAACCTATTGTTCATTGTGATTTAAAACCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCTTAGCCAGACTAGTTTCAACAATTGATGGTAACTCAAATAACCAAACCAGCTCGATGGGAATAAAAGGGACTATAGGTTATACTCCTCCAGAGTATGGAATGGATTCTCAATTGTCAACAGAAGGCGACATGTACAGCTTTGGGATTCTTCTTTTGGAGATGTTAACCGGTAGAAGACCAACTGATGAAATGTTTAAAGATGGGCACAACCTCCATAACTACGTAGAAATTGCATTTCCAAATAACATTTTGGAGGTTGTTGATGCAAATCTCCTCTCAATGGAAGTAACAACAGAAGTTGCAAATGATTTGCATCCTAATGTTGAGAGGTGCTTATCTTCGTTATTTAAGATTGGATTATCTTGTTCTGTGGAGGCTCCAAGAGAACGGATCAATATCAAGGAAGTCATCACAGAACTCAATATAATTTCAAAAACTTTGGCTGATCCAAGGGATTAA 3048 0.3799 MLPVFWSICRLVLFHLFTLNFLNKSASALGNETDYSALIIFKKSITSDPLGVLNSWNSSSHFCKWHGVTCSRKHQRVTEIKLAGYQLRGVISPHVGNLSFLRILYLDNNRFHDNMPRELGRLFRLQAISLENNTLQGQFPISLTNCSQLGEIGLDGNHFIGQIPMEIHSLTKLHFFSVAKNNLTGRIPPCIWNLSSLTSLSFAYNYLEGNIPEEIGLLKNLTVMSVSQNRLSGTLPLSLFNMSSLTDLYTAGNQFHGSLPTNMFTTLPNLRQFLFGSNQYSGPIPTSISNASRMQLFDIGLNNFVGQIPNLRKLQDLFIFAVDANHLGSNSSSSGDDWEFIKSLVNCSKLDIVFVQDNNFGGPLPKVIGNLSTHLSQLAMAGNLISGKIPSELGNLVNLIYLSIEDNLLIDVIPESFSKFHKMQELSLKINKLSGEIPAAILGNLSQLSLLDLSYNLLVGKIPSTIGNCKTLQAVDFSMNNLSGAIPTELLGLSSLSILLNLSHNSLSGNLPPEVGLLRNIGVLDISENHLSGGIPAIIGDCLSLEYLFLEGNSLDGNIPSSLSSLKGLLQLDLSRNNLSGSIPQELQNISALEWFDASFNKLEGEVPLLGIFQNASRVSLTGNDRLCGGVAKLNLRLCPPKDVKKRKHHTHRKLIIIIFSIAFLLLLSFVLTFIIYKLMRKRQRKASTDSTIEQLPKVSYQELHHATDGFSGQNLIGTGGVGFVYKGRLNSEERVVAIKVLNLQKKGAHKSFIAECNAFRNIRHRNLVKIITCCSSVDHKGNDFKAIVYEYMTNGSLEEWLHQNVEQQRTLKLEKRLEIVFGIASALHYLHYECEKPIVHCDLKPSNVLLDDDMVAHVSDFGLARLVSTIDGNSNNQTSSMGIKGTIGYTPPEYGMDSQLSTEGDMYSFGILLLEMLTGRRPTDEMFKDGHNLHNYVEIAFPNNILEVVDANLLSMEVTTEVANDLHPNVERCLSSLFKIGLSCSVEAPRERINIKEVITELNIISKTLADPRD* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1269 1015 Gene3D Ribonuclease Inhibitor 326 639 IPR032675 -
Tpr1g1269 1015 Gene3D Ribonuclease Inhibitor 30 318 IPR032675 -
Tpr1g1269 1015 Gene3D Transferase(Phosphotransferase) domain 1 793 1013 - -
Tpr1g1269 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Tpr1g1269 1015 Gene3D Phosphorylase Kinase; domain 1 674 792 - -
Tpr1g1269 1015 Pfam Protein kinase domain 714 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1269 1015 SUPERFAMILY L domain-like 32 327 - -
Tpr1g1269 1015 Pfam Leucine rich repeat 544 603 IPR001611 GO:0005515
Tpr1g1269 1015 ProSiteProfiles Protein kinase domain profile. 711 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1269 1015 SUPERFAMILY L domain-like 346 629 - -
Tpr1g1269 1015 PANTHER OS04G0122200 PROTEIN 20 1008 - -
Tpr1g1269 1015 SUPERFAMILY Protein kinase-like (PK-like) 689 1003 IPR011009 -
Tpr1g1269 1015 SMART LRR_typ_2 242 266 IPR003591 -
Tpr1g1269 1015 SMART LRR_typ_2 396 419 IPR003591 -
Tpr1g1269 1015 SMART LRR_typ_2 194 218 IPR003591 -
Tpr1g1269 1015 SMART LRR_typ_2 98 122 IPR003591 -
Tpr1g1269 1015 SMART LRR_typ_2 445 469 IPR003591 -
Tpr1g1269 1015 SMART LRR_typ_2 566 589 IPR003591 -
Tpr1g1269 1015 SMART serkin_6 711 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1269 1015 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Tpr1g1269 1015 PANTHER LRR RECEPTOR-LIKE KINASE 20 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1269 Tpr-Chr1 11398606 11403189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1269 31 1003 Receptor kinase-like Gene Family AT3G47570 45.187 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr1g1269 Pkinase 9.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1269 - - mtr:MTR_1g088940 1617.44