Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1259 ATGAATAACAGATTTTCACTAGTAGCTTGCATGCTACTTTTAAGCTTCCTTGTGGTCTGTCAAGGAGGAAGCCTTAAGAAGAGGTTTTACCAGAATTCCTGCCCTCAAGCCGACGACATTATTAAGACCAAAACATTGCAGCATGTCTCTGCTGATCCCATCTTACCCGCTAAGTTGCTTAGATTGCATTTTCATGACTGCTTTGTCAGGGGATGTGATGGCTCAGTTTTGTTGAACTCTACTGCCAATAACACTGCAGAGAAGGATTCAATTCCTAATTTAACAGTGCTTGGCTTTGATGTCATTGATGATATAAAAAGCGCGGTCGAGGAAAAATGTCCCAAAACTGTGTCTTGTGCCGACATATTAGCATTGGCCGCTAGAGACGCTGTTTCAGCACAATTTAAGAAACCTTTGTGGGAGGTGCTCACCGGTAGAAGAGACGGCACAGTGTCGAAAAGTAGTGAAGCCTTGACCGATATCCCAGCACCTTTCTTCAACTTCACCCAACTTAAGCAAAACTTTGCGCGTAAAGGTCTTACCGTGCATGATCTGGTTGTATTATCAGGAGCACACACAATTGGAATAGCTCACTGCAACTCCTTCAGTACCAGGCTTTATAACTTCACCGGAAAAGGCGACCAAGACCCTTCTTTGGATTCCACATATGCTGCATTCTTGAAGACTAAATGTAAGAGTCTGAGTGACACCACTACAACGGTGGCGATGGATCCTGGAAGCTCTGGCAATTTCGACGGTCGCTATCATCCTAACCTTCTTCAGAAAAAGGGTCTATTTCAATCAGATGCTGCACTTCTAACACAAGATCAGTCAAAAGGTATTGCTGAAGAATTGGTTAATCAAAACAAGTTCTTCACAGAGTTTGCACAGTCAATGGAGAGGATGGGAGCCATTGAGGTCCTCGCAGGCTCGGCTGGGGAAATTCGGATCAAGTGTTCCGTTCGGAAGGGTAAAGTGCGCGAGAAGATGCAATGTCCTAAGTTCAGCATTCATTTCAGATTTTCACTAGTAGCTTGCATGCTACTTTTAAGCTTCCTTGTGGTCTGTCAAGGAGGAAGCCTTAGGAAGAGGTTTTACAAGCATTCCTGTCCTCAAGCCGACGACATTATTAAGACCAAAATATTGCAGCATGTCTCTGCTGATCCCAAATTACCTGCTAAATTGCTTCTATTGCATTTTCACGACTGCTTTGTCAGGGGATGTGATGGCTCAGTTTTGTTGAACTCTACTGCCAATAACACTGCAGAGAAGGATTCAATTCCTAATTTAACAGCGAGTGGCTTTGATATCATTGATGATATAAAAAGCGCGGTCGAGGAAAAATGTCCCAAAACTGTGTCTTGTGCTGACATATTAGCATTGGCCGCTAGAGACGCGGTATCAGCACAATTTAAGAAACCTTTGTGGGAAGTGCTCACTGGTAGAAGAGATGGCACAGTGTCGAAAAGTAGCGAAGCCTTGACCAATATCCCGTCGCCTTTCTTCAACTTCACCCAGCTCAAACAAAACTTTGCGCGTAAAGGTCTTACCGTGCATGATCTGGTTGTATTATCAGGAGCACACACAATTGGAATAGCTCACTGCAACGCCTTCAGTAACAGGCTTTATAACTTCACCGGAAAAGGCGATCAAGACCCGTCTTTGGACTCCACATATGCTGCATTCTTGAAGACTAAATGTAAGAGTCTGAGTGACACCACTACTACGGTGGAGAGGGGTCTTGGCGGTTCTGGAAATTTCAACAATCACTATTATCCTAACCTTCTTCAGAAAAAAGGTCTTTTTCAATCAGATGCTGCACTTCTAACAGAAGATCAGTCAAGAGGTATTGCTGAAGAATTGGTTAATCAAAACAAGTTTTTCACAGAGTTTGCACGGTCAATGGAGAGGATGGGAGCCATTGAGGTCCTCGCAGGCTCCGCTGGGGAAATTCGGATCAAGTGTTCCGTTGTCAACTCATAA 1983 0.4402 MNNRFSLVACMLLLSFLVVCQGGSLKKRFYQNSCPQADDIIKTKTLQHVSADPILPAKLLRLHFHDCFVRGCDGSVLLNSTANNTAEKDSIPNLTVLGFDVIDDIKSAVEEKCPKTVSCADILALAARDAVSAQFKKPLWEVLTGRRDGTVSKSSEALTDIPAPFFNFTQLKQNFARKGLTVHDLVVLSGAHTIGIAHCNSFSTRLYNFTGKGDQDPSLDSTYAAFLKTKCKSLSDTTTTVAMDPGSSGNFDGRYHPNLLQKKGLFQSDAALLTQDQSKGIAEELVNQNKFFTEFAQSMERMGAIEVLAGSAGEIRIKCSVRKGKVREKMQCPKFSIHFRFSLVACMLLLSFLVVCQGGSLRKRFYKHSCPQADDIIKTKILQHVSADPKLPAKLLLLHFHDCFVRGCDGSVLLNSTANNTAEKDSIPNLTASGFDIIDDIKSAVEEKCPKTVSCADILALAARDAVSAQFKKPLWEVLTGRRDGTVSKSSEALTNIPSPFFNFTQLKQNFARKGLTVHDLVVLSGAHTIGIAHCNAFSNRLYNFTGKGDQDPSLDSTYAAFLKTKCKSLSDTTTTVERGLGGSGNFNNHYYPNLLQKKGLFQSDAALLTEDQSRGIAEELVNQNKFFTEFARSMERMGAIEVLAGSAGEIRIKCSVVNS* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1259 660 PANTHER PEROXIDASE 25-RELATED 4 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PANTHER PEROXIDASE 25-RELATED 340 658 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PANTHER PEROXIDASE 4 322 - -
Tpr1g1259 660 PANTHER PEROXIDASE 340 658 - -
Tpr1g1259 660 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 CDD secretory_peroxidase 361 658 IPR033905 GO:0004601|GO:0042744
Tpr1g1259 660 ProSiteProfiles Plant heme peroxidase family profile. 360 659 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 Pfam Peroxidase 48 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 Pfam Peroxidase 381 622 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Tpr1g1259 660 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 SUPERFAMILY Heme-dependent peroxidases 361 659 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr1g1259 660 ProSitePatterns Peroxidases proximal heme-ligand signature. 520 530 IPR019793 -
Tpr1g1259 660 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Tpr1g1259 660 Gene3D Peroxidase, domain 2 498 638 - -
Tpr1g1259 660 Gene3D Peroxidase, domain 2 162 302 - -
Tpr1g1259 660 Gene3D - 28 321 - -
Tpr1g1259 660 Gene3D - 364 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1259 Tpr-Chr1 11282559 11290386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1259 343 660 Peroxidase AT1G05260 53.231 9.16e-110 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1259 - - gsj:114405310 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0588 6 4815042 4816973 Tpr1g1259 1 11282559 11290386 PCT