Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1255 ATGGCTGGAAGTAATGAAGTCAACCTTAATGAATCTAAGAGTGTTGTTCCTCTCAATACTTGGGTGCTTATCTCCAATTTCAAGCTTGCTTACAATCTACTAAGGCGTGCCGATGGAACATTCAATAGAGAGTTAGCTGAGTTCCTTGACCGCAAGGTCCCCGCCAATACTATTCCAGTTGATGGAGTATTCTCTTTCGATCACGTGGATCGAAACACAGGACTGTTTAGTAGGGTTTATCAACCTGCTCCTGAGAATGTTACTACTTGCGGCATTATAGAGCTGGAAAAGCCCTTAAGCACCACAGAGATTGTACCTGTCATAATCTTCTTCCACGGTGGAAGCTTCTCTCATTCCTCTGCAAACAGTGCTATCTATGACACTTTCTGCCGTCGCCTCGTGAGCATGTGTAAGGCCGTTGTTGTTTCTGTAAACTACCGGCGATCACCTGAGCATCGGTATCCGTGTGCTTACGAAGACGGTTGGAATGCTCTCAATTGGGTTAAGTCAAGGACATGGCTTCAAAGTGGAAAAGATTCTAAGGTTTATGTTTACATGGCTGGCGATAGTTCTGGTGGTAACATTGCTCATCATGTTGCGGTGAGGGCTGCTGAGGAAGATGTCGAGGTACTAGGTAATATTCTTCTCCATCCACTTTTCGGTGGGGAGAAGCGTACAGAATCGGAGAAGAAACTGGATGGAAAGTATTTCGTGAAGTTGCAAGATCGTGATTGGTATTGGAGAGCTTTTCTCCCTGAAGGGGAAGATAGAGATCACCATGCTTGTAATCCACTTGGACCTAAAGGTAAAAGCCTTAAAGGACTTAAGTTCCCTAAAAGCCTTGTTTGTGTGGCCGGTTTGGATCTTCTACAAGATTGGCAATTGGAATACGCCGAAGGTCTCAAGAATTATGACCATGATGTCAAACTTCTTTACCTAAAGGAAGCTACTATTGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATTGCCTCATGAATGAGATAAACGCCTTCGTGCATCCTCCTAACTGTTGA 1038 0.4383 MAGSNEVNLNESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFSRVYQPAPENVTTCGIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSMCKAVVVSVNYRRSPEHRYPCAYEDGWNALNWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPLFGGEKRTESEKKLDGKYFVKLQDRDWYWRAFLPEGEDRDHHACNPLGPKGKSLKGLKFPKSLVCVAGLDLLQDWQLEYAEGLKNYDHDVKLLYLKEATIGFYFLPNNDHFYCLMNEINAFVHPPNC* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1255 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Tpr1g1255 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Tpr1g1255 345 SUPERFAMILY alpha/beta-Hydrolases 58 339 IPR029058 -
Tpr1g1255 345 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Tpr1g1255 345 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Tpr1g1255 345 PANTHER ARYLACETAMIDE DEACETYLASE 2 341 - -
Tpr1g1255 345 PANTHER GIBBERELLIN RECEPTOR GID1B 2 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1255 Tpr-Chr1 11215208 11218002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1255 1 341 Carbohydrate Esterase AT3G63010 78.363 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1255 K14493 - gmx:100804463 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3612 6 39275021 39277345 Tpr1g1255 1 11215208 11218002 PCT