Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1249 ATGATGAAGGAAAAAGTAGATTCACCTATTACAGTTCTTGAGGATTATTTTAGAAGTTCAGATTCAGAATCAAGTTCTTCCAAAGAACCTATTTTGGATACTGAGTCTCATGATGAAAATTCAAAACCTTTTTCAAGGTGGCATTCATTTTTTCAATTGTTGAAAAACAGATCAAAGAAACAGGTACCTGCATTGAATCATCCTCTTAATGGAGAATTCTCAACAAGAATGAGTAGAAGCATGAGGGATAATATTCTTCCAAGTTGTCTCACTCTCTCAAATGCAACTTCAACACCTTGTAGATCACCATGGAAAATCTTTTCTCATCATGATATACAAATTGCAACCAATCATTTTAGCCAAGAAAATTTGATAGGAAAAGGTGGTTATGCTGAAGTTTACAAAGGGTGTTTGGCGGATAATCGGTTAGTAGCAATCAAACGGTTAACAAGAGGAACTGCTGATGAAATCATAGCAGATTTTTTATCAGAACTTGGTGTAATGGCTCATGTTAACCATCCTAATACTGCTAAGCTTGTTGGTTATGGAGTGGATGGAGGAATGTATCTAGTTCTTGAATTGTCCGAAAAAGGGAGTCTAGCTTCGGTGCTATATGGTTCCAAGGAGAAAGTACCATGGTGTATTAGGCACAAAATTGCATTAGGAACAGCAAAGGGTATATTATATCTTCATGAGGGTTGTCAAAAAAGGTTTATCCACAGAGATATAAAAGCTGCCAATATCTTGCTCACAGAAGATTTTGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGTTGCCAGAGAATTGGACTCATCACAATGTTTCAAAATTTGAAGGAACTTTCGGCTACCTTGCTCCTGAATACTTGCTTCATGGCATAGTAGATGAGAAAACAGATGTATTTGCATTTGGTGTATTGCTATTAGAATTAGTCAGTGGGAGAAGAGCACTTGATTATTCACAACAAAGCCTTGTTTTATGGGCAAAACCTTTGTTGAAAAAGAATGATATTATGGAGCTGATAGATCCGTCACTAGCTAGGGAATTCAACGTTAGGCAGGTGAATCTTATGCTCTTGACAGCTGCTTTATGCATACAACAGTCCTCCATTCGCCGCCCTTCTATGAGACAGGTTGTGCAGCTTCTGAATGGAAACCTTAGTTCCTTCAAGGCCATGAAGAAAACTCGATTGCCAGTCTTCCGAAGAGTCTTTCGGGAAGAGCTCCTTGATGATGATGATTCTAATTAG 1254 0.3812 MMKEKVDSPITVLEDYFRSSDSESSSSKEPILDTESHDENSKPFSRWHSFFQLLKNRSKKQVPALNHPLNGEFSTRMSRSMRDNILPSCLTLSNATSTPCRSPWKIFSHHDIQIATNHFSQENLIGKGGYAEVYKGCLADNRLVAIKRLTRGTADEIIADFLSELGVMAHVNHPNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKEKVPWCIRHKIALGTAKGILYLHEGCQKRFIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHNVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLKKNDIMELIDPSLAREFNVRQVNLMLLTAALCIQQSSIRRPSMRQVVQLLNGNLSSFKAMKKTRLPVFRRVFREELLDDDDSN* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1249 417 PANTHER OS08G0249100 PROTEIN 2 413 - -
Tpr1g1249 417 ProSiteProfiles Protein kinase domain profile. 119 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1249 417 ProSitePatterns Protein kinases ATP-binding region signature. 125 147 IPR017441 GO:0005524
Tpr1g1249 417 SMART serkin_6 119 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1249 417 SUPERFAMILY Protein kinase-like (PK-like) 96 384 IPR011009 -
Tpr1g1249 417 Gene3D Phosphorylase Kinase; domain 1 93 193 - -
Tpr1g1249 417 PANTHER PROTEIN KINASE FAMILY PROTEIN 2 413 - -
Tpr1g1249 417 Gene3D Transferase(Phosphotransferase) domain 1 196 402 - -
Tpr1g1249 417 MobiDBLite consensus disorder prediction 17 40 - -
Tpr1g1249 417 Pfam Protein kinase domain 120 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1249 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1249 Tpr-Chr1 11167581 11170809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1249 107 386 Receptor kinase-like Gene Family AT1G53420 42.014 2.76e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tpr1g1249 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1249 - - gmx:100780587 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1249 1 11167581 11170809 Tpr1g1492 1 13702237 13706028 ECH
Tpr1g1249 1 11167581 11170809 Tpr6g0228 6 1857797 1861543 ECH
Tpr1g1249 1 11167581 11170809 Tpr1g1249 1 11167581 11170809 ECH
Tpr7g2743 7 34628483 34632046 Tpr1g1249 1 11167581 11170809 ECH