Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1243 ATGGGTTTCGTTGTTACCTCGCTAATCTTCCTACTCATCGGAATTATCGCTTCTTTTTCTACAACTATTTGCTTCAACAAAGGATCTTCTTCTAATCTTTTTCACCTAACTTTGGTCCTTACTTCAACAATATGCTGTTGGATGATGTGGGCGATTGTATATCTGGCACAGATGAACCCTCTCATAGTTCCCATATTGAGTGGCGAATAG 210 0.3952 MGFVVTSLIFLLIGIIASFSTTICFNKGSSSNLFHLTLVLTSTICCWMMWAIVYLAQMNPLIVPILSGE* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1243 69 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Tpr1g1243 69 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Tpr1g1243 69 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1243 Tpr-Chr1 11113239 11115403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1243 1 67 Primary Pumps ATPases(2) AT4G26710 79.104 2.95e-35 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1243 K02153 - han:110942100 117.087