Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1242 ATGGCTACTCTTCTTCCTTCTTCCCTCACAAACCCAAATAAGCTTCTCTCATATTCTTCCTATTTCCACAATGCATCACTATCCACTTCACCTTCTTCTGTTTCTCTTCACCCCAAAACGCAACGTTTCACTCGTCGTTTTGGGTCTGTTAGATGTTCTTTAGCTTATGTTGATAATGCTAAGATTAAGGTCGTTGGAATTGGGGGTGGTGGTAACAATGCTGTTAACCGCATGATTGGTAGTGGTTTACAAGGTGTAGACTTCTATGCAATAAATACTGATGCTCAAGCGCTATTGCATTCGGCTGCGGAGAATCCTATTAAAATTGGAGAGCTTCTGACTCGTGGATTAGGTACTGGTGGGAATCCACTTTTGGGCGAACAAGCTGCAGAGGAATCAAAAGAGGCTATTTCTAATGCCCTTAAAGGATCGGATTTGGTGTTTATAACAGCTGGGATGGGTGGGGGTACTGGGTCCGGTGCTGCCCCAGTTGTGGCCCAAATATCAAAAGAGGCTGGTTACTTGACTGTTGGTGTTGTTACCTATCCTTTCAGTTTTGAAGGACGTAAAAGATCCTTGCAGGCACTTGAAGCCATTGAAAAGCTTCAGAAAAATGTCGATACACTTATTGTGATTCCAAATGACCGGCTGCTTGACATAGCTGATGAGCAGATGCCACTTCAAGATGCTTTTCGTCTTGCGGATGATGTTTTACGACAAGGAGTTCAGGGAATTTCAGACATTATAACAATACCTGGACTTGTGAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGTACTGCAATGCTTGGAGTCGGTGTTTCCTCCGGTAAAAACCGAGCAGAAGAAGCAGCAGAACAGGCTACTTTGGCTCCTTTAATTGGATCATCTATTCAATCAGCCACTGGTGTAGTGTATAATATTACTGGAGGAAAGGACATTACCCTGCAGGAAGTCAACAGGGTATCTCAGGTTGTGACTAGTTTGGCTGATCCTTCTGCCAATATTATATTTGGAGCTGTTGTTGATGATCGTTACACCGGTGAGATTCATGTCACTATCATTGCCACAGGCTTTTCGCAGTCTTTTCAGAAGAAGCTACTAACAGATCCAAGGGCTGCAAAACTTCTTGACAAAGTGGCCGAGGGAAAAGAAAGTAAGACAGTGCCCTCTCCCCTCAAGTCCTCAAACTTATCTTCCAAAGTTGAATCTAGAGCACCATCCCCACGAAAACTCTTTTTTTAG 1257 0.4344 MATLLPSSLTNPNKLLSYSSYFHNASLSTSPSSVSLHPKTQRFTRRFGSVRCSLAYVDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLHSAAENPIKIGELLTRGLGTGGNPLLGEQAAEESKEAISNALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLTDPRAAKLLDKVAEGKESKTVPSPLKSSNLSSKVESRAPSPRKLFF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1242 418 ProSitePatterns FtsZ protein signature 1. 92 126 IPR020805 GO:0005525
Tpr1g1242 418 Hamap Cell division protein FtsZ [ftsZ]. 57 387 IPR000158 GO:0003924|GO:0005525
Tpr1g1242 418 SMART Tubulin_4 61 253 IPR003008 GO:0005525
Tpr1g1242 418 Gene3D Tubulin/FtsZ, GTPase domain 55 268 IPR036525 -
Tpr1g1242 418 Gene3D - 269 375 IPR037103 -
Tpr1g1242 418 ProSitePatterns FtsZ protein signature 2. 145 166 IPR020805 GO:0005525
Tpr1g1242 418 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 154 160 IPR017975 GO:0005525|GO:0005874|GO:0007017
Tpr1g1242 418 MobiDBLite consensus disorder prediction 385 418 - -
Tpr1g1242 418 TIGRFAM ftsZ: cell division protein FtsZ 58 372 IPR000158 GO:0003924|GO:0005525
Tpr1g1242 418 Pfam Tubulin/FtsZ family, GTPase domain 61 221 IPR003008 GO:0005525
Tpr1g1242 418 SMART Tubulin_C_4 255 372 IPR018316 -
Tpr1g1242 418 Pfam FtsZ family, C-terminal domain 270 363 IPR024757 -
Tpr1g1242 418 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 418 - -
Tpr1g1242 418 CDD FtsZ_type1 74 362 IPR000158 GO:0003924|GO:0005525
Tpr1g1242 418 PRINTS Cell division protein FtsZ signature 146 166 IPR003008 GO:0005525
Tpr1g1242 418 PRINTS Cell division protein FtsZ signature 174 195 IPR003008 GO:0005525
Tpr1g1242 418 PRINTS Cell division protein FtsZ signature 237 259 IPR003008 GO:0005525
Tpr1g1242 418 PRINTS Cell division protein FtsZ signature 260 281 IPR003008 GO:0005525
Tpr1g1242 418 MobiDBLite consensus disorder prediction 393 408 - -
Tpr1g1242 418 SUPERFAMILY Tubulin C-terminal domain-like 255 371 IPR008280 -
Tpr1g1242 418 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 418 IPR045061 GO:0003924|GO:0005525
Tpr1g1242 418 SUPERFAMILY Tubulin nucleotide-binding domain-like 60 256 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1242 Tpr-Chr1 11104869 11107753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1242 149 357 PP2C-type Phosphatase Gene Family AT1G75010 21.461 7.63e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1242 K03531 - gmx:100808722 672.159