Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1241 ATGGCCGAAAATGCAAAGCGCTTCATCATCGGAATCGACCTCGGCACCACCTACTCTTGTGTCGGAGTTTGGCACCATGACAGTGTCCGAATCATCACCAACGACCACGGCAACCGGACCACCCCTTCTTGCGTCGCTTTCACCGACTCCGAACGCTTAATTGGCGATGCTGCCAAGAGCCAGGTCACCAGGAATCCCGTCAACACCATCTTCGACGCCAAGCGTTTGATTGGAAGGAGATTCTCTGATGCTTCTGTCCAGAGTGACATGAAGCTATGGCCATTCAAGGTTATTGCTGGTCCGGACGACAAACCCATGATTGTTGTTAGCTACAAGAATGAGGAGAAGCAACTCACTGCTGAGGAGATTTCCTCCATGGTCCTCATCAAAATGCGTGAGATCGCGGAGGCTTATCTTGGTTCCACCGTGAAGGACGTTGTTGTCACTGTTCCAGCATACTTCAATGACTCTCAGCGCCAGGCTACCAAGGATGCTGGTGTCATCGCTGGCCTTAATGTCATGCGTATCATCAACGAACCCACTGCTGCTGCACTTGCCTATGGCCTTGATACGGTTCCCATTGTTGATGATGAGAAGCACGTTTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTTTTCTAACCATTGATGATGGTGTCTTTCAAGTTCATGCCACTGCAGGAGACAGCCGTCTTGGAGGTGAAGACTTTGATAACAGGATGGTTGACAATTTTGTTCAGGAATTCAAGAGGAAGCACGAGAAGGAAATTAGTGGGAACCCGAGGGCTTTAAGAAAGTTGAGGACCGCATGTGAAAGGGCAAAAAGGACTCTCTCATCCACCAAACAGACCACCATTGAGATTGACTCATTATATGAAGGTATTGACTTCTATACCACAATCACTCGTCACAGGTTTGAAGAACTCAACATGGACCTCTTCAACAATTGCATAGACACTGTCGAGCGGTGTTTGAGGGAAGCTCAAATGGACAAGAGCAGTGTCCATGATATTGTTCTTGTTGGTGGGTCTACGAGGATCCCAAAAGTGCAACAGTTGTTGCAGGATTTCTTCAATGGGAAGGAGCTCTGCAAGAGCATCAACCCAGATGAGGCTGTTGCTTATGGAGCTGCTCTTCAGGCTGCTGTCTTGAACCATGAGGAGAACAAGAAGGTTGAGGATATTACGTTGTTTGATGTTACTCCCCTTTCACTTGGTCATTTCATAATTGGAATTGACCTCGGCACCACCTACTCGTGCGTTGGAGTCTGGCACCATGGCGGTGTCCAAATCATCACCAACGATCACGGCAACCGGACCACCCCTTCTTACGTTGCTTTCACTGATTCAGAACGCTTCATTGGCGATGCTGCCAAGATCCAGGTCACCAGGAACCCCGTCAACACAGTCTTCGATGCCAAGCGTTTGATTGGAAGGAGATTCTCCGATGCTTCGGTTCAGAGTGACATGAAGCTATGGCCATTCAAGGTTATTGCTGGTACTGCTGACAAGCCAATGATTGTTGTTAACTACAAGAATGAGGAGAAGCACTTCACTGCTGAGGAGATTTCATCCATGGTCCTCATCAAGATGCGTGAGATAGCTGAGGCTTATCTTGGTTCCACCGTGAAGGATGTTGTTGTCACTGTTCCAGCATACTTCAATGACTCTCAGCGCCAGGCCACCAAGGATGCTGGTGTCATCGCTGGCCTTAATGTCATGCGTATCATCAACGAACCCACTGCTGCTGCCCTTGCCTATGGCCTTGATATGGAGGATCCCATCATTGATGATGAGAAGATCGTTTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTAGAAATTGCAGATAGTGTCTTTCAAGTTAAAGCCACTGCAGGAGACAGCCGTCTTGGAGGTGAAGACTTTGATAACAGGATGGTTGACAATTTTGTTCAGGAATTCAAGAGGAAGCACGAGAAGGAAATTAGTGGGAACCCGAGGGCTTTAAGAAAGTTGAGGACCGCATGTGAAAGGGCAAAAAGGACTCTCTCATCCACCAAACAGACCACCATTGAGATTGACTCATTATATGAAGGTATTGACTTCTATACCACAATCACTCGTCACAGGTTTGAAGAACTCAACATGGACCTCTTCAACAATTGCATAGACACTGTCGAGCGGTGTTTGAGGGAAGCTCAAATGGACAAGAGCAGTGTCCATGATATTGTTCTTGTTGGTGGGTCTACGAGGATCCCAAAAGTGCAACAGTTGTTGCAGGATTTCTTCAATGGGAAGGAGCTCTGCAAGAGCATCAACCCAGATGAGGCTGTTGCTTATGGAGCCGCTCTTCAGGCTGCTATCTTGAACCATGAGGAGAACGAGAAGGTTAAGGAACTTACGTTGGTGGATATCACTCCCCTTTCACTTGGTGTGGAAACTGTTGGTGGTGTCATGACTGTCCTGATTCCAAAGAACTCTATGATCCCGTACAAGATGGATCGGGTTTTCTCAACCTACTCCGACAACCAGGTTAGTGTGTTGATCAGGGTGTACGAGGGTGAGAGAACCAAGAGCAGGGAGAACAACTTGCTAGGTAAATTCGAGCTTTCTGGCATCCTTCTTGCTCCAAGGGGTGTTCCTCAGATCAGTGTTTGCTTTCAAATTGATCACAATGGTATCATGAATGTCTCTGCTGAGGACAGGGGTACAGGGAAGAAGAACAATATCACTATCACCAATGACAAGGGCAGGCTCTCGAAGGAGGAGATTGAGAAGATGGTGCAGGAGGCGGAGAAGTACAAGGCTGAGGATGAGGAGCACAAGAAGAACGTTGTGGCCAAGATTGCCTTGGAACAAGAGGTGGAGAGGTATAAACCCTTCTGTTTTCCAAAAGGTGCTCCGGATCAACACTCGGAGGCACAAGTAGAACATGATACTTGCCATGATCCGATTACATTAGCATCCCTAAGTTCAAGTTTACAGTCTTTCCCTTCCAGAAATTCTGGTTATTATTTCAACTCCACAAAAGTGGCTGCACAAAATATTACAAAGGGACTAAAAGACGATGATTGCTATGTTATTGGATTGTATGGAAAGAGAGGCTGTGGTAAAACAGCATTGGTGAAAGCTAAGATGGAAGAGTATGAAAAGATTTTCCATAGAGTGATATTTCACCCAGTGTCTGAGAATCAAGATATCAAGAGCATTCAAGTGGGAATTTCTAGGTACTTGAATGTGTTTGATAAAGATGACAGTGATGGTGCGAGAATAGTGAAAATAATTTCGGCATTAGAAAAAAAGGATAGAACTACCCTAGTCATCTTGGATAATTTTCCATCAAAGTCTAAACTGGAAGAATTGGGAATTCCTTATAATAGCAAACAGTACAAGTTCCTTTTGACCGCACGTGATGAGACAGAGTGCACCTTAATGGGATGTGATCGTTTGATTCATCTGAAGCCCTTATCTGATGAAGAAGCTTTTACCCTGCTACATAAACTGTCCGGTGTTGAATCCCAAACTGATCTATTTAAAGTGGTACGAGATGTTGCTTTTAAATGCAAAGGCTTACCTGGTTTAATTAAAGATGTGGCGTTTTCCTTGAAAAAGAAGCCTATTGAGAAGTGGGAAGAATCCTTAGTCAGTCTAAGCCACTCAACAGCACAATACCAAATTTTTATCAGTTTTAGAGGAAAGGACACTCGGGAGATTTTCACAAATCATCTCTATGAGGCTTTGTGTAAAGAGGGATTCGAGACCTTCAAAGATGATGAAGCATTGGAGGGTGGATCCCCAATTGATAAGCTTCTTGAAGCCATTGAAGAGTCAAGGTTTGCAATTATTGTTTTGTCAGAAAATTTTGCAGACTCCAAATGGTGTCTTAAAGAACTTGTCAAGATTCTTGATTGTCGAAAAAGGAAGAAACAATTGGTTTTGCCAATTTTTTATGAAGTGGAACCATCCGACATAAGGCATCTAAAAGGGAGGTACTGTGAAGCTATGGCCGAACATGGAAAAGAGTTAGGCAAAGATTCTAAGACGGTATTGGAATGGACATTAGCTTTGAATGATATTTCCCGATTGAAAGGAGAACATTTCCGAATTTCCAACTTCAAAGGAGAGCATTACGAAAGGTACAGAGATCAACTTATTGGAAAGATTATAAGATTTGCCCATAATAACAAACATCGCTTGCATATACAAAGCATGTATACAAACTAG 4224 0.4448 MAENAKRFIIGIDLGTTYSCVGVWHHDSVRIITNDHGNRTTPSCVAFTDSERLIGDAAKSQVTRNPVNTIFDAKRLIGRRFSDASVQSDMKLWPFKVIAGPDDKPMIVVSYKNEEKQLTAEEISSMVLIKMREIAEAYLGSTVKDVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGLDTVPIVDDEKHVLIFDLGGGTFDVSFLTIDDGVFQVHATAGDSRLGGEDFDNRMVDNFVQEFKRKHEKEISGNPRALRKLRTACERAKRTLSSTKQTTIEIDSLYEGIDFYTTITRHRFEELNMDLFNNCIDTVERCLREAQMDKSSVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAALQAAVLNHEENKKVEDITLFDVTPLSLGHFIIGIDLGTTYSCVGVWHHGGVQIITNDHGNRTTPSYVAFTDSERFIGDAAKIQVTRNPVNTVFDAKRLIGRRFSDASVQSDMKLWPFKVIAGTADKPMIVVNYKNEEKHFTAEEISSMVLIKMREIAEAYLGSTVKDVVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGLDMEDPIIDDEKIVLIFDLGGGTFDVSLLEIADSVFQVKATAGDSRLGGEDFDNRMVDNFVQEFKRKHEKEISGNPRALRKLRTACERAKRTLSSTKQTTIEIDSLYEGIDFYTTITRHRFEELNMDLFNNCIDTVERCLREAQMDKSSVHDIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAALQAAILNHEENEKVKELTLVDITPLSLGVETVGGVMTVLIPKNSMIPYKMDRVFSTYSDNQVSVLIRVYEGERTKSRENNLLGKFELSGILLAPRGVPQISVCFQIDHNGIMNVSAEDRGTGKKNNITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKNVVAKIALEQEVERYKPFCFPKGAPDQHSEAQVEHDTCHDPITLASLSSSLQSFPSRNSGYYFNSTKVAAQNITKGLKDDDCYVIGLYGKRGCGKTALVKAKMEEYEKIFHRVIFHPVSENQDIKSIQVGISRYLNVFDKDDSDGARIVKIISALEKKDRTTLVILDNFPSKSKLEELGIPYNSKQYKFLLTARDETECTLMGCDRLIHLKPLSDEEAFTLLHKLSGVESQTDLFKVVRDVAFKCKGLPGLIKDVAFSLKKKPIEKWEESLVSLSHSTAQYQIFISFRGKDTREIFTNHLYEALCKEGFETFKDDEALEGGSPIDKLLEAIEESRFAIIVLSENFADSKWCLKELVKILDCRKRKKQLVLPIFYEVEPSDIRHLKGRYCEAMAEHGKELGKDSKTVLEWTLALNDISRLKGEHFRISNFKGEHYERYRDQLIGKIIRFAHNNKHRLHIQSMYTN* 1408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1241 1407 SMART till_3 1223 1362 IPR000157 GO:0007165
Tpr1g1241 1407 Coils Coil 266 286 - -
Tpr1g1241 1407 CDD HSPA1-2_6-8-like_NBD 10 387 - -
Tpr1g1241 1407 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 412 953 - -
Tpr1g1241 1407 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 7 408 - -
Tpr1g1241 1407 SUPERFAMILY Actin-like ATPase domain 196 386 IPR043129 -
Tpr1g1241 1407 ProSitePatterns Heat shock hsp70 proteins family signature 2. 606 619 IPR018181 -
Tpr1g1241 1407 PRINTS 70kDa heat shock protein signature 410 423 - -
Tpr1g1241 1407 PRINTS 70kDa heat shock protein signature 438 450 - -
Tpr1g1241 1407 PRINTS 70kDa heat shock protein signature 460 468 - -
Tpr1g1241 1407 PRINTS 70kDa heat shock protein signature 548 568 - -
Tpr1g1241 1407 PRINTS 70kDa heat shock protein signature 612 622 - -
Tpr1g1241 1407 PRINTS 70kDa heat shock protein signature 740 756 - -
Tpr1g1241 1407 PRINTS 70kDa heat shock protein signature 772 792 - -
Tpr1g1241 1407 PRINTS 70kDa heat shock protein signature 799 818 - -
Tpr1g1241 1407 PRINTS 70kDa heat shock protein signature 880 896 - -
Tpr1g1241 1407 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Tpr1g1241 1407 Gene3D - 1227 1393 IPR035897 -
Tpr1g1241 1407 SUPERFAMILY Actin-like ATPase domain 410 593 IPR043129 -
Tpr1g1241 1407 CDD HSPA1-2_6-8-like_NBD 412 790 - -
Tpr1g1241 1407 Coils Coil 921 944 - -
Tpr1g1241 1407 Gene3D - 10 384 - -
Tpr1g1241 1407 Gene3D - 412 787 - -
Tpr1g1241 1407 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 788 961 IPR029047 -
Tpr1g1241 1407 Pfam NB-ARC domain 1017 1223 IPR002182 GO:0043531
Tpr1g1241 1407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1014 1218 IPR027417 -
Tpr1g1241 1407 Gene3D - 989 1149 IPR027417 -
Tpr1g1241 1407 ProSiteProfiles TIR domain profile. 1222 1384 IPR000157 GO:0007165
Tpr1g1241 1407 Gene3D Actin; Chain A, domain 4 235 318 - -
Tpr1g1241 1407 Gene3D Actin; Chain A, domain 4 638 721 - -
Tpr1g1241 1407 Pfam Hsp70 protein 9 408 IPR013126 GO:0005524|GO:0140662
Tpr1g1241 1407 Pfam Hsp70 protein 411 959 IPR013126 GO:0005524|GO:0140662
Tpr1g1241 1407 Gene3D - 192 366 - -
Tpr1g1241 1407 Gene3D - 594 769 - -
Tpr1g1241 1407 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Tpr1g1241 1407 PANTHER HEAT SHOCK PROTEIN 70KDA 7 408 IPR013126 GO:0005524|GO:0140662
Tpr1g1241 1407 PANTHER HEAT SHOCK PROTEIN 70KDA 412 953 IPR013126 GO:0005524|GO:0140662
Tpr1g1241 1407 Coils Coil 669 689 - -
Tpr1g1241 1407 SUPERFAMILY Actin-like ATPase domain 599 789 IPR043129 -
Tpr1g1241 1407 SUPERFAMILY Toll/Interleukin receptor TIR domain 1217 1363 IPR035897 -
Tpr1g1241 1407 Pfam TIR domain 1223 1365 IPR000157 GO:0007165
Tpr1g1241 1407 ProSitePatterns Heat shock hsp70 proteins family signature 3. 743 757 IPR018181 -
Tpr1g1241 1407 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr1g1241 1407 Gene3D - 1155 1226 IPR042197 -
Tpr1g1241 1407 ProSitePatterns Heat shock hsp70 proteins family signature 1. 414 421 IPR018181 -
Tpr1g1241 1407 Gene3D - 473 528 - -
Tpr1g1241 1407 Gene3D - 71 126 - -
Tpr1g1241 1407 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 795 952 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1241 Tpr-Chr1 11091754 11103374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1241 412 952 Calmodulin-binding Proteins AT3G12580 80.037 0.0 897