Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1215 ATGAGTAATGAGGATCCTGGAATTTCAGGCTATCAATATAGAGGTATAGAAAATGTTGGGTTTAGCGACATAACCCCTTCTGATGAAGATAATGTATGTCATCAGACCGGTGAAGAATTTTCTTCCGAGTTCTTACGCGATCGGGTTGCTTTAAGGAAGTTTCCTGTCATACCTGATGCTGAGCAGCGCCTGCCAAACATATTGAACTTCAATAATAACAATTATCAATTGATCTACGAGGATCAAAATCAAAATCATGTCCTTGGTCTAGGGAGAATAGATTCTGATAACAATTTGGATTTTTCAGAGATTGCTTCATCTAGAGGCTATGTTGCTGAAGCTGACAACAGGGCTTATCATAATAATTTGAGCAAATACCAGTGTGAACTTGGTGGTATCAGACAAGCATCGAGAGCGTTTTCCAGACAATCATCAAGTAGGTTTTCTGACGAATGCGATCAATTTGCCTCAGGACCAAATAGTGGTATCAGACAAACATCGGGTGCATTTTCCAGACAATTATCAAGTAGGTTTTCTGACGGATGCGATCAAGTTGGCTCAGGACCAAATACTCCATCTATTTATGCTGTTGAGTCTCCTCGTTCATGCCATCCTTATGGAACAGTATTCTCTGAAGGTTCCTTCTTCAAGAAAATAAAGTTTCTATGTAGTTTTGGAGGTCGAATACTGCCAAGGCCAAATGACGGGAAACTCAGATATGTGGGTGGAGAGACGCGGATTATATCGATCAGGAAGAACATCACGCATGAAGAACTTACGGAGAAAACTTCTGGTATTTGCAATCAAACTCACACTATCAAATACCAACTTCCTGGAGAGGATCTTGATGCTCTTATATCTGTTTGTTCTGATGAGGATCTTCATCATATGATTGAGGAATATGAAGAGCTTGAAAGAGCTGGAGGATCTCAACGGCTTAGGATTTTTCTTATACCTTCAAATGAACCTGATAGTCCAAGCTCTAATGAATCAAGAGTCAATCAGCAAAGTGATGTTGATTACCATTATGTTGTTGCTGTTAATGGTATACTAGATCGAAGTCCGCGAAAGAATCATGGTGGACTAAGTCTGGCAAACCATACAAGCCAATTTGCAAATACCTCTGATTACAACAACCCACATTTCCATAGGGAATCATCCACATATGCATTTGCTTCAGAGGTAAAGGATTGCAACCCAACCTCTTCAAATTTGGGAGACATAATGTCAAAACCAGGTCCATTTTTAACATCACTTAAGGTAGGGGGCAAGTCATTTAATCAAAGGCATCTCTCTGGCATTTGTGTGCAGCCTAACGATCAAAAAAATTCTAATGTTCAGTTATTTACGGATCAATCATATAATGTTGTTAATGAAAACATTATACCCTATGGCATGGAAAAAATTCCACGTGACAACTCTTTGTATGTAGATGATACCAGTTATGCTGATCCCATTACATATTATAACAATCTTACCCAAGGGTCTCCATGTGTGAACTATCATCCTAGTAATCAATATACATTGGAGTCTGACCAAGACAGGAAGTCTAATGTTGAATTTAAGTTTCACAGACGAACCAATAGTAAAGAATTTGTCTCTCCCGCAATTTGTAATCAAACTGATATGATATTTGAGAGACCTTTAGTTAATAGTGAAGGTTCATACCATTTTAACAATATTGTCTCTCATCCTCATGAGTCAGCGAGTGTATTTTCGGTGTCTGGCGATAGGGATGTATCTCAATACAAAATGTTGCATACTCTTTCTGAGTCAACGCTTCTGGAGAATAATGAAAATTACAAAGGTCACATGCAATTTCCGTTTAATGTTGAGAGAGATAAATTGTCATCATTGGAAACTTCAAGTTCTTTGGAAGAATGTTCAATACAGCCAGGAGAGATAAATGATGGGAGAGAACATATGGCTTTACATCAAAAGCCGCCCACTTTTGGAATGACTGGTAGTTGCAAGAGATCGTCAGAAATTGGTAGAGAGAAATTACAACATGCAAATAAAAGTGTTGATTGGCTCGATGAAAAAGTTGGATCTATGCCACAACATTTACAGTACATCTACTACCAACAGGGTGCTTGCTCATCTTCACCAGACTTACAAAGTATTGAATGCAATGCATCTGCTGCACCATTTATCCCTTCACTATCTACTAGAAGCATTGAAGAGCAACCACATGGTATACCATTAGACACACTTGCTTCTGAGTTTTCTATGAGGAGCCAAAATTCATCAATGCATCGCCAATTTATCGTGTCGGAGACAAAATATGGTCATCCACCTCCCCTTGACTCTTTTGAGTTACGACCTACTAACTCCCTACTCATAACAGAGTCTGTACTACCAATCTCATATCCAGATATGGTTTATTCTTCACTAAGAGAGGTTGTTGTCCCTGATGATGATCTTGCATACTACCAGAACCAAAAGGAAGAAAACATAGTCAATGACAAACAATCTCATGAATACATAGATGAATTTTGCATCAACAAGCCAGAATCAACAACAGTTGTCACAGAGCAAATTGATTATATTTCTTCAGGTATCCGGTCATGCTTAGCTAAAGAGGACAAAGTTGAACATACTTCTCTTACAAAGGCAGGGGTAGTGTTTGTTAATCATGAATCTGAAAGTAAGCTCGCAAAAGCTGATAGCGGAAACTTCAATAGGCCTATTGGTGATTCAGAAACTTCTGAAAAAGAGCCTGAATTGTATGGTTTACAGATTATTGAGAATGGCGATCTCGAAGAACTACATGAGTTAGGATCTGGAACCTTTGGAACCGTTTATCATGGCAAATGGAGGGGAACCGATGTTGCAATTAAGAGAATAAAAAGTAGTTGTTTCGCTGGTAGACTGTCAGAGCAAGAACGGTTGACTAAAGATTTTTGGAGAGAGGCAAAGATCCTGTCAACTCTTCACCATCCAAATGTGGTGGCATTTTACGGGATAGTTCCAGATGGCCCAGGTGGAACATTGGCAACTGTAACAGAATACATGTTGCATGGATCACTGAGGAATGTTCTCTTGAAGAAGGAGAGAGTGCTTGATCGTCGTAAAAGGGTCATGATTGCAATGGATGCAGCCTTTGGAATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATTTGGGCGATCCTGAACGGCCTGTATGTAAGGTTGGAGATTTTGGCCTATCAAGAATTAAACGCAACACACTTGTTTCGGGTGGTGTCAGAGGGACTCTCCCATGGATGGCACCAGAATTATTGGATGGCAACAGTTGTAGAGTATCTGAGAAGGTCGATATTTTCTCATTTGGTATAGCAATGTGGGAAATCTTGACTGGCGAAGAACCATACGCTAATATGCATTGTGGTGCCATCATAGGAGGTATTGTTAGTAACACGCTCAGGCCATCTATTCCGAAACGATGTGATTCTGAGTGGAAAAAGTTGATGGAAGAGTGTTGGAGCCCTGATCCAGAAGCCAGACCATCTTTCACAGAAGTTAAAAATAGACTCCGCAGCATGTCAGCGGCTCTGCAAAAAAAGAGACCTAATGTTAGGAGTAGGTGA 3603 0.3952 MSNEDPGISGYQYRGIENVGFSDITPSDEDNVCHQTGEEFSSEFLRDRVALRKFPVIPDAEQRLPNILNFNNNNYQLIYEDQNQNHVLGLGRIDSDNNLDFSEIASSRGYVAEADNRAYHNNLSKYQCELGGIRQASRAFSRQSSSRFSDECDQFASGPNSGIRQTSGAFSRQLSSRFSDGCDQVGSGPNTPSIYAVESPRSCHPYGTVFSEGSFFKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNITHEELTEKTSGICNQTHTIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERAGGSQRLRIFLIPSNEPDSPSSNESRVNQQSDVDYHYVVAVNGILDRSPRKNHGGLSLANHTSQFANTSDYNNPHFHRESSTYAFASEVKDCNPTSSNLGDIMSKPGPFLTSLKVGGKSFNQRHLSGICVQPNDQKNSNVQLFTDQSYNVVNENIIPYGMEKIPRDNSLYVDDTSYADPITYYNNLTQGSPCVNYHPSNQYTLESDQDRKSNVEFKFHRRTNSKEFVSPAICNQTDMIFERPLVNSEGSYHFNNIVSHPHESASVFSVSGDRDVSQYKMLHTLSESTLLENNENYKGHMQFPFNVERDKLSSLETSSSLEECSIQPGEINDGREHMALHQKPPTFGMTGSCKRSSEIGREKLQHANKSVDWLDEKVGSMPQHLQYIYYQQGACSSSPDLQSIECNASAAPFIPSLSTRSIEEQPHGIPLDTLASEFSMRSQNSSMHRQFIVSETKYGHPPPLDSFELRPTNSLLITESVLPISYPDMVYSSLREVVVPDDDLAYYQNQKEENIVNDKQSHEYIDEFCINKPESTTVVTEQIDYISSGIRSCLAKEDKVEHTSLTKAGVVFVNHESESKLAKADSGNFNRPIGDSETSEKEPELYGLQIIENGDLEELHELGSGTFGTVYHGKWRGTDVAIKRIKSSCFAGRLSEQERLTKDFWREAKILSTLHHPNVVAFYGIVPDGPGGTLATVTEYMLHGSLRNVLLKKERVLDRRKRVMIAMDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEILTGEEPYANMHCGAIIGGIVSNTLRPSIPKRCDSEWKKLMEECWSPDPEARPSFTEVKNRLRSMSAALQKKRPNVRSR* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1215 1200 CDD STKc_MAP3K-like 926 1183 - -
Tpr1g1215 1200 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 134 602 - -
Tpr1g1215 1200 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 821 1197 - -
Tpr1g1215 1200 ProSitePatterns Protein kinases ATP-binding region signature. 926 947 IPR017441 GO:0005524
Tpr1g1215 1200 Pfam Protein tyrosine and serine/threonine kinase 922 1183 IPR001245 GO:0004672|GO:0006468
Tpr1g1215 1200 SUPERFAMILY CAD & PB1 domains 234 328 - -
Tpr1g1215 1200 SMART serkin_6 920 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1215 1200 PANTHER SERINE-THREONINE PROTEIN KINASE 821 1197 - -
Tpr1g1215 1200 PANTHER SERINE-THREONINE PROTEIN KINASE 134 602 - -
Tpr1g1215 1200 CDD PB1_UP2 222 318 - -
Tpr1g1215 1200 Pfam PB1 domain 234 318 IPR000270 GO:0005515
Tpr1g1215 1200 Gene3D Phosphorylase Kinase; domain 1 913 1007 - -
Tpr1g1215 1200 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1045 1057 IPR008271 GO:0004672|GO:0006468
Tpr1g1215 1200 Gene3D Transferase(Phosphotransferase) domain 1 1008 1199 - -
Tpr1g1215 1200 SUPERFAMILY Protein kinase-like (PK-like) 908 1183 IPR011009 -
Tpr1g1215 1200 ProSiteProfiles Protein kinase domain profile. 920 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g1215 1200 PRINTS Tyrosine kinase catalytic domain signature 1002 1015 IPR001245 GO:0004672|GO:0006468
Tpr1g1215 1200 PRINTS Tyrosine kinase catalytic domain signature 1039 1057 IPR001245 GO:0004672|GO:0006468
Tpr1g1215 1200 PRINTS Tyrosine kinase catalytic domain signature 1110 1132 IPR001245 GO:0004672|GO:0006468
Tpr1g1215 1200 PRINTS Tyrosine kinase catalytic domain signature 1154 1176 IPR001245 GO:0004672|GO:0006468
Tpr1g1215 1200 Gene3D - 237 320 - -
Tpr1g1215 1200 SMART PB1_new 233 320 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1215 Tpr-Chr1 10878098 10884907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1215 218 358 MAP Kinase Kinase Kinase AT1G16270 57.343 1.49e-38 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Tpr1g1215 PK_Tyr_Ser-Thr 2.7e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1215 - - gmx:100810711 1568.9