Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1212 ATGGCAGAGATTAAACTACATGGATTTTGGTATAGTCCTTTTACTTTAAGGGTAGTATGGACCCTAAATTTGAAGGGTATACCATATGAGAACATAGAGGAAGATCGCTTCAATAAGAGTCCTCAACTTCTTGAATATAACCCGGTTCACAAAAAGACTCCAGTGCTAGTTCATGATGGAAAACCTATCTGTGAGTCTATGATCATTGTTGAATACATTGATCAGATATGGCCACAGAATTCATTGCTTCCTGCTGATCCCTATGACAGAGCTCAAGCTCGATTTTGGGTCAAATATATCGATGATATGTTTTTAGCAATTACGGCACACTTTCGTACCAGTGGTGGTGAAGAGCGAGTGAAGGCCAGAGAGAATATATGGGAGCGACTCAAAGTTGTTGAGGATCAGTGTTTGGATGATCAGAAGAAATTCTATGGGGGAGACACCATTAACATTGTAGACATAGCTCTTGGATCTTTTGTCAATTTTATTAAGGTTCAAGATAGGTTTGAAGTGAAGATCTTGCAAACGGAGAGATTCCCCCGCTTGCATTTATGGTTTAATAAATTCAAGGATGTTCCGGTAATCAAAGAAAACACACCTAACCAAGAGAAGTTGGTGGCATTTCTTATTCCTCTTACTGAAAAAATCAAGGCATCTTCTTGA 666 0.3889 MAEIKLHGFWYSPFTLRVVWTLNLKGIPYENIEEDRFNKSPQLLEYNPVHKKTPVLVHDGKPICESMIIVEYIDQIWPQNSLLPADPYDRAQARFWVKYIDDMFLAITAHFRTSGGEERVKARENIWERLKVVEDQCLDDQKKFYGGDTINIVDIALGSFVNFIKVQDRFEVKILQTERFPRLHLWFNKFKDVPVIKENTPNQEKLVAFLIPLTEKIKASS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1212 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 209 IPR010987 -
Tpr1g1212 221 CDD GST_N_Tau 4 77 - -
Tpr1g1212 221 Gene3D Glutaredoxin 1 82 - -
Tpr1g1212 221 CDD GST_C_Tau 87 210 IPR045074 GO:0004364|GO:0006749
Tpr1g1212 221 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Tpr1g1212 221 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Tpr1g1212 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 213 - -
Tpr1g1212 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Tpr1g1212 221 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Tpr1g1212 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 213 IPR045073 -
Tpr1g1212 221 Gene3D - 83 220 - -
Tpr1g1212 221 SFLD Main (cytGST) 1 220 - -
Tpr1g1212 221 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Tpr1g1212 221 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1212 Tpr-Chr1 10864522 10865768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1212 4 210 Glutathione S-transferase Gene Family AT3G09270 46.190 1.18e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1212 K00799 - gmx:547584 310.842