Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1211 ATGACAGATATTAAACTACATGGATTTTGGTATAGTCCTTTTACTTTAAGGGTAGTATGGACCCTAAATCTGAAGGGTATACCATATGAGAACATAGAGGAAGATCGTTTCAACAAGAGTCCTCAACTTCTTGAATATAACCCAATTCACAAAAAGACTCCTGTGCTAGTTCATGATGGAAAACCTATATGTGAGTCCATGATCATTGTTGAATACATTGATGAGATATGGCCACAGAGCTCATTGCTTCCTGTTGATCCTTATGACAGAGCTCAAGCTCGATTTTGGGTTAAATATGTTGATGAATTGATTTTAGCTATTAGGGTACACTTTCGTAGCAAAAGTGGTGAAGAGCGGGAGAAGGCCAGAGAGAATATATGGGAGCGACTCGGAGTTGTTGAGGATCAGTGTTTGGATGATCAGAAGAAATTCTATGGGGGAGATACCATTAATATTGTAGACATAGCTCTTGGATCTTTTGTTAATTTTATTAAGGTTCAGGATAGGTTAGAAGTGAAGATCTTGCAAACTGAGAGGTTTCCCCGCTTGCATTTATGGTTTAATAATTTCAAGGATGTTCCGATCATCCACGAAAACACCCCTGACCAAGAGAAGTGGGAAGCTTTTCTTATTGAAAAAAACAAGGCATCTTCTTGA 657 0.3836 MTDIKLHGFWYSPFTLRVVWTLNLKGIPYENIEEDRFNKSPQLLEYNPIHKKTPVLVHDGKPICESMIIVEYIDEIWPQSSLLPVDPYDRAQARFWVKYVDELILAIRVHFRSKSGEEREKARENIWERLGVVEDQCLDDQKKFYGGDTINIVDIALGSFVNFIKVQDRLEVKILQTERFPRLHLWFNNFKDVPIIHENTPDQEKWEAFLIEKNKASS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1211 218 CDD GST_N_Tau 4 77 - -
Tpr1g1211 218 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Tpr1g1211 218 Gene3D - 83 218 - -
Tpr1g1211 218 CDD GST_C_Tau 87 210 IPR045074 GO:0004364|GO:0006749
Tpr1g1211 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 211 IPR045073 -
Tpr1g1211 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Tpr1g1211 218 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 211 - -
Tpr1g1211 218 Gene3D Glutaredoxin 1 82 - -
Tpr1g1211 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 217 IPR010987 -
Tpr1g1211 218 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Tpr1g1211 218 Pfam Glutathione S-transferase, C-terminal domain 118 187 - -
Tpr1g1211 218 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Tpr1g1211 218 SUPERFAMILY GST C-terminal domain-like 75 211 IPR036282 -
Tpr1g1211 218 SUPERFAMILY Thioredoxin-like 3 104 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1211 Tpr-Chr1 10861884 10862939 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1211 4 210 Glutathione S-transferase Gene Family AT3G09270 46.919 3.31e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1211 K00799 - gmx:547584 299.286