Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1207 ATGGAGGATATTAAGGTTTTTGGTCTATGGTCAAGTCCATTTTCTCAAAGAGTTGTGTGGACACTAAAATTAAAGGGTGTGAGTTATGAGTATTATGATGAAGATCTTGCAAATAAGAGTAACCTATTACTACAATACAATCCAATCTACAAGAAAGTTCCTGTTCTTGTACATAATGGAAAACCAATATCAGAGTCAATGGTGATTGTTCAATATATCGATGAAACTTGGCCTCAGATTCCTCTATTGCCTCAAGATGCTTATGAGAGGGCCAAAGCTCGTTTTTGGTCAAAATTCATCGAGGAAAAGTCAATGCAAATGATGGAGTTTTTTCTATATGATGGAGAAAGACAAGAGAGAGCAATAAAAGAAACTTTGGACATCTTGAGAGTGATAGAAAATGAAAGTGGGCTTAGTGAAAAAATGTTCATTTGTGGCAACACAATTGGATTGGCAGACATAGCATTGGGTTGGGTTGCACATACTTTGCCAGTTATGGAAGAAATTGTTGGAGTCAAGTTCATCACTATTGATGCATTTCCTCACCTTCACTCTTGGGTGAAGAATTTCTTGGAAATTCCTGTTATAAAGAATAATCTCCCACCCCATGAGAAACTTGTTGAGTATTTTAGAGAAAGGAGGAAGGTGTTTCTTGCAATGGCTTCTCATCACCATCATCATTAG 684 0.3684 MEDIKVFGLWSSPFSQRVVWTLKLKGVSYEYYDEDLANKSNLLLQYNPIYKKVPVLVHNGKPISESMVIVQYIDETWPQIPLLPQDAYERAKARFWSKFIEEKSMQMMEFFLYDGERQERAIKETLDILRVIENESGLSEKMFICGNTIGLADIALGWVAHTLPVMEEIVGVKFITIDAFPHLHSWVKNFLEIPVIKNNLPPHEKLVEYFRERRKVFLAMASHHHHH* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1207 227 CDD GST_N_Tau 4 77 - -
Tpr1g1207 227 Gene3D - 86 221 - -
Tpr1g1207 227 SFLD Glutathione Transferase (cytosolic) 1 221 IPR040079 -
Tpr1g1207 227 CDD GST_C_Tau 87 213 IPR045074 GO:0004364|GO:0006749
Tpr1g1207 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 217 IPR010987 -
Tpr1g1207 227 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Tpr1g1207 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Tpr1g1207 227 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Tpr1g1207 227 Pfam Glutathione S-transferase, C-terminal domain 119 188 - -
Tpr1g1207 227 Gene3D Glutaredoxin 1 85 - -
Tpr1g1207 227 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Tpr1g1207 227 SFLD Main.3: Omega- and Tau-like 1 221 IPR045073 -
Tpr1g1207 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 209 IPR045073 -
Tpr1g1207 227 PANTHER GLUTATHIONE S-TRANSFERASE, C-TERMINAL, THIOREDOXIN-LIKE FOLD 8 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1207 Tpr-Chr1 10826414 10827794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1207 2 213 Glutathione S-transferase Gene Family AT2G29420 49.296 1.61e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1207 K00799 - tcc:18602840 281.952