Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1201 ATGCCAGGCTTTCCTGTCGCGGCTGGTGAAACATGTAATTTTATAAGCACAGATCAACAACCTAGCCCTGTAGATGCTTCTGTGCAATTGTCTGCAGAAGAGAAAGCTGTTGCAGAACAGAGTCTTTCAGTTTATTGCAAGCCTGTAGAGTTTTACAACATTCTTCATCACCGTATTTTGCAACGCAATCCATTTTTCATTCCGAGATGTTTAGAGTACAGGAGAGAGGCTAGGAGAAAAAAAAGGACACAAATGACAGTTATGCTGTCATGGAATGATGAAGAAACTCAAAATGTGTTTCCTTTGTATATCGGTCTAGCAAGGCGTGATCCTAATAATGTAGATGCTGATTATTCTGCTGTTTATCTACTCAGTCAGATATATACCTTTCGAGGTTCCTCCAGCATTGACAGGAACTATAAAATCAAAGCAGAGTTTGTGCTTTGGGAAGTTAATGAGTTAGCAGCGGACGGCTCACTTTTTCTGTTGTTTTTCACCACTGAGGGAAATTCAAATTCATCACCTAGAGTCAATGCAAGCCTGGGGCCTTCAGATCCGACTTCTCATGAATCAATAGCTGAAAAGATCTGCTTATACGAGAAAATTTCTTTTCAATCAATTTATATGGCTTGGGATAGTTCTCCAAATTTCCTTTGGGGACTACGAGCTGAGGTTATGACTACTCTTGATCTGCTTCCATGTATTTTGAAGTATGATGTTCTAAATAAGGGCACGACCATCGCAATCCAAGAACTCCGGAATTCTGAGATTGTGAGTACATCAAAGCATGTTCAAATCAAAATCTTTGCTGAAGAGCTCATGGGCATGGAGAAATCTCTCAACTATACAAATGTCAGGGTTAATGTACCATCATCATCATCATCATCGTCGTCGTCGTCATCTCGTTTCATTCGGTTGAAAGAAGGACATGTGAAATTTAATTACAGGTATTTCGATAACAAATTGCAGAGAACAGAAGACACTGAAGATTTTTCCTGTCCATTATGTTATTTAAGATGTGCAAGCTATAAGGGTCTAAGATGTCATCTGCTCGCATCACATGATCTTTTCAACTATGAATTTTCGGCATTGGAACATTGTCTGGCTGTTAATGTGTCTTTGAATTATGATACCTGGAGAACTGAGATTATTGGAGATGATGTTGATCCAAGATTGCAAACTTTTTACCTTCGTTGCAAGCGATACAAGCACACAAGTCCAGAAGTTGCATGTTTTGAAGAGTACCAGGGTGCTGAATCACCGGCCTTAGCTAATAATGCTGACCCACCGGTCTTTGCTATGGATGTTGACCCGCCGGTCTTTGCTATGGATGCTGACCCGCCGGTCTTTGCTATGGATGCAGACCCACTGGTTTTAGCTATGGATGTAGGCCCACCGGTCTTAGCTAATGATACATACCCACCGAACTTAACTATTGATGCAGACCCACCGGTCTTAGCTATTGATGCAGACCCACCAATCTTAGCTATTGATATGGACCCACCGGTCTTAGCTATTGATGCGGACCAACCAATCTTACCTATTGATGCAGACCCACCAGTCTTGGCTATGGATGCGGACCCACCGGTCTTGGTTAAGGATGCAGACCAACCGGTGTTAGCTATTGATGCGGACCCACCACTCTTAGCTAAGGATGCAGACCCACCGGTCTTAGCTATTGATGCGGACCCACCGGCCATAGCTACGGATGCAGACCAAATATTCTTAGAGTCTGAAACTCCTTTAGGAGATATTGAGTTTTTGAAGAAGGCTGATGGAAATTCTGCAACTATATCAGGAGTTGCAAATGAAAATGTTGTATCCAATCCTGATCCAGATTGTGTCCCACCAATATCTGAGCATGACTATGTGACTCCTGCAGTGCCACAGGCTGACAATGCAGCGAAGTTAGACGACCAAAGCAAAGCCCGGTTGGTTGGTCGAAAGTTTTATCATTCTCACAAAGCCCAGGAAATGTCAATTGGCGAAGTTCTATCAGATTATGATAGCGAGAATGAAATTGATCCTGAAGTTGAAGACATTGAAGAGCGAATGAGGCTTAATCTTCATGATGTTAGCAAAGAAGAGAAGGAATTCATGTTCATGTGGAACTCATTTATACGGAAGCAACGTGTGCTGGTAGATTCTCACGTTCGTTGGGCATGTAAGGCTTTCTCAATATTGCATGGCGCTGAGCTTGTTAAATCCCGTGAATTATCTTGGTTTTGGAGAATGTTCAGGCTCAAATTATACAATTTTGGTCTTATAGATGGAAAGGTCATGAACGATTGTAGTATTATTCTCGAACAATACGAGAAGCAAAAATCAAATCCTGAGATCCCAATAGCTAATATAAACTCCATTCTTTTGACCCCTCGTAAAAGTAAAAGAAGAAAATGA 2400 0.4171 MPGFPVAAGETCNFISTDQQPSPVDASVQLSAEEKAVAEQSLSVYCKPVEFYNILHHRILQRNPFFIPRCLEYRREARRKKRTQMTVMLSWNDEETQNVFPLYIGLARRDPNNVDADYSAVYLLSQIYTFRGSSSIDRNYKIKAEFVLWEVNELAADGSLFLLFFTTEGNSNSSPRVNASLGPSDPTSHESIAEKICLYEKISFQSIYMAWDSSPNFLWGLRAEVMTTLDLLPCILKYDVLNKGTTIAIQELRNSEIVSTSKHVQIKIFAEELMGMEKSLNYTNVRVNVPSSSSSSSSSSSRFIRLKEGHVKFNYRYFDNKLQRTEDTEDFSCPLCYLRCASYKGLRCHLLASHDLFNYEFSALEHCLAVNVSLNYDTWRTEIIGDDVDPRLQTFYLRCKRYKHTSPEVACFEEYQGAESPALANNADPPVFAMDVDPPVFAMDADPPVFAMDADPLVLAMDVGPPVLANDTYPPNLTIDADPPVLAIDADPPILAIDMDPPVLAIDADQPILPIDADPPVLAMDADPPVLVKDADQPVLAIDADPPLLAKDADPPVLAIDADPPAIATDADQIFLESETPLGDIEFLKKADGNSATISGVANENVVSNPDPDCVPPISEHDYVTPAVPQADNAAKLDDQSKARLVGRKFYHSHKAQEMSIGEVLSDYDSENEIDPEVEDIEERMRLNLHDVSKEEKEFMFMWNSFIRKQRVLVDSHVRWACKAFSILHGAELVKSRELSWFWRMFRLKLYNFGLIDGKVMNDCSIILEQYEKQKSNPEIPIANINSILLTPRKSKRRK* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1201 799 Pfam VEFS-Box of polycomb protein 638 766 IPR019135 -
Tpr1g1201 799 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 25 778 - -
Tpr1g1201 799 PANTHER POLYCOMB GROUP PROTEIN 25 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1201 Tpr-Chr1 10772038 10787593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1201 581 772 C2H2 Transcription Factor Family AT5G51230 42.487 2.35e-36 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1201 1 10772038 10787593 Tpr1g1201 1 10772038 10787593 ECH