Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1190 ATGAGTTCCAATTCTAACAAGTTGAACCAAAGTAGCATGCTTCTTGCAAAGAAATCAATGAGTGAGACTAATGATCAAGGAGAAGTCTTGAAGATTAATGGAAACACAATTTCTATGAAAAACTATGCACTTTCATCTGAAGAGCAGAACAAGCTTATTTGTGAGATACAAAGTGCTCTAAATGATCAAAACCACGTTATTGATAATGACAAGTTACGGTTAGTTATAAACACAATCATGAAACACTGTTTTGAATTATTACAGATGAAAACACGTTCTGCAAATGTAGATGTCTTCAATGTTGGTTCTGCTACAACATGTGAACGTAATCTATGGTGGATTGGAGGCTTTCGCCCTTCTCAACTTCTTCAGATTATTCTGCCTCAAGTTCAACATATGTGCAGCCAGCAACAACTTGGTGTTATTTATGATCTTGGACAATCATGTCAAGTAGCAGAATATGCTCTTGCACAAGGCATGGTAAGACTCCAGCAAAATATTGATAAAGCAACACCAACAGATGACAAAGAGTTTCAACTGACGTATGTACATCAACAACTATGCTTCTTCAAGCAGGCTGATAATCTTCGCCAGGAATTCCTGCATCAATTTTCTCGTCTCCTTACAATTTCTCAGCAAGCTGAATTCATAGTTGCTCTCAAGGAACATCTGCATAATCCGCAGTCTCGGAGGAGCTCACTTTGA 705 0.3787 MSSNSNKLNQSSMLLAKKSMSETNDQGEVLKINGNTISMKNYALSSEEQNKLICEIQSALNDQNHVIDNDKLRLVINTIMKHCFELLQMKTRSANVDVFNVGSATTCERNLWWIGGFRPSQLLQIILPQVQHMCSQQQLGVIYDLGQSCQVAEYALAQGMVRLQQNIDKATPTDDKEFQLTYVHQQLCFFKQADNLRQEFLHQFSRLLTISQQAEFIVALKEHLHNPQSRRSSL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1190 234 Pfam Seed dormancy control 53 127 IPR025422 GO:0006351|GO:0043565
Tpr1g1190 234 PANTHER FACTOR BZIP PROTEIN, PUTATIVE-RELATED 1 232 - -
Tpr1g1190 234 ProSiteProfiles DOG1 domain profile. 35 234 IPR025422 GO:0006351|GO:0043565
Tpr1g1190 234 PANTHER TRANSCRIPTION FACTOR TGA9 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1190 Tpr-Chr1 10708998 10711622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1190 42 224 Calmodulin-binding Proteins AT5G10030 40.306 2.65e-37 132