Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1175 ATGGGAATAGCAATGGGTGGTACTGATTTATTGAGTGAAAAAGCAGCTTTGATGAGAGAGTCTCTTCAAAAAAGCCAAACGATCACAGACAACGTTGTCACCATTCTTGGTTCCTTTGACCACCGTCTCTCCGCCCTTGAAACCGCCATGCGTCCAACTCAGATTAGGACTCATTCTATTAGAAAAGCTCATGAGAATATTGATAAGACTTTGAAGGCTGCAGAGATTATATTGTCTCACTTTGATCAATTTCGTCAGGCAGAGGCAAAAATACTCAAAGGGCCGCATGAAGACCTGGAAAACTATCTTGAAGCAATTGCTAAGTTGAGAAGCAACATTCAGTTTTTTGGCAGTAAGAATAGTTTTAAGAATAGTGACGGTGTTGTCAGCCATGCCAGTAGTTTGCTAAATAAAGCTATTTCGAAGCTACAGGACGAGTTTAATCAGCTATTATTATCTTACAGCAAACCTGTGGAACCCGAGCGTCTCTTTGACTGCCTTCCAAACTCGATGCGACCTTCGTCACCTGGTCATGAGGGTGATCATAATGGCAAGTCCAATCATCATTCTGAGTCTCACAACAATAATGCTGATGCTGTTGTGTACACACCTCCCGCTCTTATACCACCAAGAATTTTGCCACTGCTACATGATTTAGCTCAGCAAATGATTGAAGCTGGTCACCGACCACAGTTACTCACAATGTACAGGGAAGCCCGTTCTAATGTATTGGAAGAAAGTCTTCAAAAACTTGGTGTTGAGAAACTCAACAAAGACGATGTTCAAAAGCTGCAGTGGGAGATTTTGGAAGCCAAAATCGGAAACTGGATTCATTTCATGCGAATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTTGCTGAACAGTGTTTTGCCGAGGTGACTACAAATAGTGTGTCTATGCTACTTAGCTTTGGAGAAGCAATAGCCAAAAGCAAGAGATCTCCAGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTGCATTCAGAGATTGAAACACTTTTTAAAGGCAAAGCTTGTGCGGCAATCAGAGACGCTGCAATGGCTTTGACAAAACGACTTGCACAAACTGCGCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGACGCTACAAAGACTGCAGTAACAGATGGAACTGTTCATCCTTTGACTAGCTATGTTATTAACTATGTCAAGTTTTTGTTTGACTATCGGTCCACCTTGAAGCAACTTTTCCAAGAAATTGAAGGTGGAACTGATTCTTCCCAGCTAGCTACTGTAACAATGCGAATAATGCAAGCTTTACAAATCAATCTAGATGGAAAATCAAAGCAGTATAAAGACCCCGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTGCTTGGTGATGATTGGGTACAAAGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCTTATCTATTCAGGGACTTGCCTCATCAGGTGGTGGGAGTAGTAATGCAGGCGGTGATGGCGGAGCTGGAAGTAGTAGTGGTGCTTCAAGAGCCCTTGTTAAAGAAAGGTTTAAGACATTCAATGTTATGTTTGAGGAACTCCATCAGAAACAATCACAATGGACAGTTCCAGACAGCGAATTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTACAGATCATTCGTGAAACGTTTTGGGCCTCTAGTGGAGAGTGGAAAGAATCCTCAGAAGTACATAAAATACATCGCAGAAGATCTAGATCGAATGTTGGGCGAATTTTTTGAAGGAAAAAACATGAATGAAACCAAGCGGTAA 1950 0.4138 MGIAMGGTDLLSEKAALMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEIILSHFDQFRQAEAKILKGPHEDLENYLEAIAKLRSNIQFFGSKNSFKNSDGVVSHASSLLNKAISKLQDEFNQLLLSYSKPVEPERLFDCLPNSMRPSSPGHEGDHNGKSNHHSESHNNNADAVVYTPPALIPPRILPLLHDLAQQMIEAGHRPQLLTMYREARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLAEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACAAIRDAAMALTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEIEGGTDSSQLATVTMRIMQALQINLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLASSGGGSSNAGGDGGAGSSSGASRALVKERFKTFNVMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYIAEDLDRMLGEFFEGKNMNETKR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1175 649 MobiDBLite consensus disorder prediction 178 192 - -
Tpr1g1175 649 SUPERFAMILY Cullin repeat-like 77 640 IPR016159 -
Tpr1g1175 649 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 645 - -
Tpr1g1175 649 Pfam Exo70 exocyst complex subunit 275 636 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr1g1175 649 MobiDBLite consensus disorder prediction 165 196 - -
Tpr1g1175 649 Gene3D Exocyst complex component Exo70 75 649 - -
Tpr1g1175 649 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 645 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1175 Tpr-Chr1 10646372 10653777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1175 9 649 EXO70 exocyst subunit family AT5G03540 75.000 0.0 990
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1175 K07195 - gmx:100813987 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1175 1 10646372 10653777 Tpr1g1175 1 10646372 10653777 ECH