Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1156 ATGGGTCGCGAACCTCTCTTACTTCCAACCCCAACCCCAACCCTACCCATAGCCCCATCTACCACCACTGTGACTACCCTTCCTCTCGCTGTTTCAGTACCATCTGCTTCTTCTACTGCTGCTCCACCTACTTCTCTTGCTCCTGGGTTTAGGTTTCACCCAACTGATGAAGAACTCGTTATCTATTACCTCAAGCGCAAGGTTTGTGGAAAACCCTTTCGATTTGACGCTATTGCTGAAGTTGACATCTATAAGAGCGAACCCTGGGACCTTTCTGATAAGTCAAGGTTGAAGACCAGGGACCAAGAGTGGTATTTTTTCAGTGCATTGGACAAGAAGTATGGAAATGGGGGCAGAATGAACAGGGCTACTCTTAAAGGGTACTGGAAAGCTACTGGAAATGATCGTCCGGTTAAGCATGAATTAAGGACCGTAGGGTTGAAGAAAACTTTGGTGTTTCACAGTGGCCGAGCTCCTGATGGTAAGAGAACTAACTGGGTTATGCACGAGTACAGGCTCGTTGAAGAAGAGATGGAGAGGGAGAGGGCTGGGAATGGATCCTCTCAGCCACAGGATGCATATGTCTTGTGTAGAGTATTTCACAAAAATAACATTGGACCTCCAAATGGACAACGATATGCACCTTTTGTTGAAGAAGAGTGGGAAGAATGCTCGGGAATGGTTCCTGGAGCAGAGCTCGTGTATAATGGTCCTGTTGATCGCCCTGTTGATCGTCCTGTTGATCGCCCTGTTGATCACCCTGTTGATCGTCCTGTTGATTGCCCTGTTGACCGCCCTCTGCGTATTGAATACAACAACGGTGGTGTTTCGTGCAGTGAAGGAAGAAATAACATTGTGCAGGACACTCAATCCAACAATAAAACTCCACTTCTTGTTCAAAACAATAAAACTCCACTTGATGTGAACAAGCTACCGATTGAGACCCAAAATCTTCTTGCCGTGTGCAAGAGGGAGAGCATGACTGAGTTTTCATCACCAGAAAAGGATGATTCTAAGCGTATGCATGTGGATGATGATTCTAAGCGTATGCATGTGGATGATGATTCTAAGCGTATGCATGTGGATGATGTGGACCCATCACCCCAAACTAATAACCCAAAGCCATTTCCCTTACCTCAAATATACAAAAGGCGGCGGTATAACTTGAACACCAATCACTCTAATGTTTCCAGAGATTCATTCCCTAACAGTCAGGATCCATGCTCATCCACAATAACCACTGCCGCGACAACAGTCCCGACAACTGCTGCCCCTGCCAAAACTACCAACGCTGCACCGAAGAAACATTTTCTGTCTGCACTGGTGGAGTTTTCTCTGCTAGAATCACTTGAATCGAAGAAGGAAAAACAGGTCTCGGTTCAGCCAGAAGATTTTGACTTGGGAAATTTTGAATCGACTGTGCCTCCGAGTGTTGCAAAGTACATCAAACGCTTGCAGAGTGAAACTCATAAGCTTGGCCTTGAAAAGGAGACAATGCGGTTCGAGTTAACAAGTGCTCAAGCCATGATTAACATCCTCCAGTCTCGTGTCGAAACTCTCAGTAAAGAGAACGGAGAAATGAAGAAGATGATGATGATGAGAAATCCTTAG 1611 0.4569 MGREPLLLPTPTPTLPIAPSTTTVTTLPLAVSVPSASSTAAPPTSLAPGFRFHPTDEELVIYYLKRKVCGKPFRFDAIAEVDIYKSEPWDLSDKSRLKTRDQEWYFFSALDKKYGNGGRMNRATLKGYWKATGNDRPVKHELRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVEEEMERERAGNGSSQPQDAYVLCRVFHKNNIGPPNGQRYAPFVEEEWEECSGMVPGAELVYNGPVDRPVDRPVDRPVDHPVDRPVDCPVDRPLRIEYNNGGVSCSEGRNNIVQDTQSNNKTPLLVQNNKTPLDVNKLPIETQNLLAVCKRESMTEFSSPEKDDSKRMHVDDDSKRMHVDDDSKRMHVDDVDPSPQTNNPKPFPLPQIYKRRRYNLNTNHSNVSRDSFPNSQDPCSSTITTAATTVPTTAAPAKTTNAAPKKHFLSALVEFSLLESLESKKEKQVSVQPEDFDLGNFESTVPPSVAKYIKRLQSETHKLGLEKETMRFELTSAQAMINILQSRVETLSKENGEMKKMMMMRNP* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1156 536 MobiDBLite consensus disorder prediction 328 364 - -
Tpr1g1156 536 Coils Coil 503 530 - -
Tpr1g1156 536 SUPERFAMILY NAC domain 37 203 IPR036093 GO:0003677|GO:0006355
Tpr1g1156 536 PANTHER NAC DOMAIN-CONTAINING PROTEIN 78-LIKE 38 531 - -
Tpr1g1156 536 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 38 531 - -
Tpr1g1156 536 MobiDBLite consensus disorder prediction 326 381 - -
Tpr1g1156 536 ProSiteProfiles NAC domain profile. 46 202 IPR003441 GO:0003677|GO:0006355
Tpr1g1156 536 Gene3D NAC domain 55 205 IPR036093 GO:0003677|GO:0006355
Tpr1g1156 536 Pfam No apical meristem (NAM) protein 48 173 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1156 Tpr-Chr1 10433378 10439634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1156 26 529 NAC Transcription Factor Family AT3G10480 44.107 7.23e-116 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr1g1156 NAM 9.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1156 - - gmx:100808783 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1156 1 10433378 10439634 Tpr1g1156 1 10433378 10439634 ECH